LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Trre7g04976	ATGTTACTCACTTCTCATCATCACCATTTCACACATTATTCACCTTCTTCTTTTTCTTCCCTCTTACGCCCCCTTCATCTCACCACTCCAATCCTCAACTTCAAATTACAATCCACATCTCACAGGTTAACCTCCTTCACCGTCCACGCCGATTCCTTCCGTCACCGATCCCAAATTTCCGTCTCCAACCATGTCGGAGATTCCAATTTCGATTCCTTCCTTTCCTTTCTCGAACTCTCCTGCCTTCTCTCTTCAGTTATCGTATCAGCCACCGTCGCCGTAACTTCGGTTTGGAAGAAGGAGTTGTTTGCAGCAATTGGTAACAGAGTTGCTCCGTGGAGTTTGTTGATGTTTGTGGTCGGTGTTTTTACCGGTGCTTTGATTAGGAGAAGGAAATGGAGAGAGACGGTGAACGGTGGATTTTCTGGTTCGGAGGTGAATTTGTTGCAGAGGATTGAGAAATTGGAGGAGGATTTGAGAAATTCTACGACGGTTGTTAGGGTTTTGTCTAGACAGCTTGAGAAATTGGGGATTAGGTTTCGTGTTACTCGAAAGTCTTTGAAGGAACCTATAACTGAGACTGCAGCTCTGGCACAGAAGAATTCTGAGGCCGCAAGAGCATTAGCCATGCAATCAGAAATTTTGGAGAAGGAGCTTGGGGAAATTCAAAAGGTTTTACTAGCGATGCAGGTACAACAGCAAAAACAACTTGATCTCATTCTTGCAATTGCGAAGGCCGGTAAGCTATGGGAAAGCAAGCGTGAAACTAGTGAAGAACACGGGACAATAGAAATGTCTAACTCAGCTGCAAATCACAATGAGGTAAATCAGGAGGTCCACCAAGTTTGA	849	0.4464	MLLTSHHHHFTHYSPSSFSSLLRPLHLTTPILNFKLQSTSHRLTSFTVHADSFRHRSQISVSNHVGDSNFDSFLSFLELSCLLSSVIVSATVAVTSVWKKELFAAIGNRVAPWSLLMFVVGVFTGALIRRRKWRETVNGGFSGSEVNLLQRIEKLEEDLRNSTTVVRVLSRQLEKLGIRFRVTRKSLKEPITETAALAQKNSEAARALAMQSEILEKELGEIQKVLLAMQVQQQKQLDLILAIAKAGKLWESKRETSEEHGTIEMSNSAANHNEVNQEVHQV	282

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Trre7g04976	282	PANTHER	TRANSMEMBRANE PROTEIN	9	277	-	-
	Trre7g04976	282	Coils	Coil	152	172	-	-
	Trre7g04976	282	MobiDBLite	consensus disorder prediction	262	282	-	-
	Trre7g04976	282	MobiDBLite	consensus disorder prediction	255	282	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Trre7g04976	Trre-Chr7	56786020	56788754	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Trre7g04976	46	251	Eukaryotic Initiation Factors Gene Family	AT5G65250	54.976	6.60e-64	201

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Trre7g04976	-		-	gmx:100790782	286.189