Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04963 ATGCATACTCTCATTTTTTCTCTCTTTACCTTCCATTCAAATTTCCATTTTCAACAACATGTTTCTCTCTTCTTTTTTTCCCAATTCTCATTCATGTATTATCATATATCATTCTCTTCCTCTCTCATTATTATTTCAATCCATATGGGAAGAACCAAAGTTTCCACCCTTTTTCCTTCCAATAACAACCATCATTATTCTCTTCCTCTTTCCAATACCATTCACCAAACTCTTGTTAACAAACCCAATTCACAGAAAAACCGTTTCCCCTTTTCAGTTTTGGAATTTCTCCGACGCTTTATCTATGGAAGGAAAGTTGATGGAGGTTCAAGAACAGAGGAAGAAGAGAAAGTGTATTCTTGGTTATATACCTTGGCTCAGTCTGAGAAAAACATGGTCTTTGAGTATGTTAGGTCAACTGAAAGAGGCTTAAGTTTTACTGAAGCTGAGAGGAGGCTGCAGGAAAATGGCCGAAATGTTCCGCTCGAATATTCTTTTCCAAGCTGGTGGCATCTTCTATGGAACGCGTTTTTCCATCCTTTCAATATGATTCTGATTGTTTTATCTTCGATGTCATTCATTGCCAGTGACTATCCCAATGGTTTCATCATGTTCATATTGGTTTTTATCAGTGTCATCCTTCGTTTCTGTCTGGAACACAAAAGCTCAAAAGCAGCTATGAAGCTTTCAGAATTTTTAAGATGTCCTATAAAAGTTCAAAGGTGTGCCGGTAGAATTGAGCAGAAAGAACTGATAGTTCAAGTTGATCACAAGGATGTAGTTCCAGGTGACATTGTGATTTTTGAACCCGGCGACCTCTTTCCTGGAGATGTCAGACTGTTATCGTCAAAACACCTTGTTGTAAGCCAGTCCTCACTAACCGGGGAATCTTGGGCGACAAACAAAACTTCCGATGTTAGAGAAGATCACAACACCCCTTTACTAGATTTAAGGAATATTTGCTTTATGGGAACAAATGTGGTATCAGGTACTGGAACAGGTTTAGTTATTTCAACTGGATCCAATACATACATGAGCACCATGTTTTCAAAAATTGGGAAGAAGAAGCCACCAGATGATTTCGAAAAGGGTCTCAGATGGATATTTTACATGCTTATTTCAGTTATGCTTGTAGTTGTTACAATTATGTTTGTGACAGATTACACTACATCTCATAATTTGAGCAAGAGTGTTCTCTTTGCCATCTCAGTTGCATCTGTCCTCAATCCTCAGATGCTTCCTCTCATCATTAACACATGCCTCGCGAAAGGAGCACTCGCTATGGCTAAAGATAGATGTATTGTAAAAAGTCTAACAACTATACGCGAGATGGGATCAATGGATATCCTTTGTATTGATAAGACAGGTACCCTAACAATGAACCATGCAATCTTGGTTAATCATCTTGACGGCAGAGGTTTACCCCGAGAAAGAGTTTTATGCTACGCCTTCCTTAATTCTTACTTCAAAACTGAGCAAAAGTATCCTCTGGATGATGCAATTCAAGCACATGTATATTCAAATGGATTCAAGTTTCAGCCATCCAAGTGGAAGAAGATAGATGAGATTCCTTTCGACTTCATAAGAAGAAGAGTATCTGTCATGTTAGAAACAGACGACAAACACTCGCAGTTCTTCGGGAGGTTAATGGTAACAAAAGGAGCATTGTTGGAAGTCATAAATGTTTGTTCTTTTATTGAGAATTTTGACACAAATGAAATTACTACCATCTCCTCAGATGATTTTCAAAGGATTTTAAATCTATCTGAAGAATTGAGCAATGAAGGGTTAAGGGTTATAGCAGTAGCTATAAAGAAACTAGGAATGCAGAAAACTTGCGAAACAAGTAATGGAAGCAAGAGTGGTGCCGATGATTCTGAAAGAGACATGATATTCCTTGGCCTCATAACATTTTTTGACCCACCTAAGGACTCAGCAAAGGAAGCACTTTGGTGTTTGGCTGAGAAGGGAGTGAAAGCAAAAGTTTTAACAGGTGACTCACTTTCCTTAACCACGAGAATATGCAGAGAAGTTGGCATAAGTACCACTCATGTTATAACAGGACCCGAGCTAGAAGAATTTGATCAAGAAACTTTCCATGAGACTGTTAAAAGAGCCACGGTACTAGCCCGTCTCACCCCAACTCAGAAACTCCGTGTGGTGCAATCGTTGCAGACAATAGGAAACCATGTAGTTGGTTTCTTAGGAGACGGTGTAAACGATTCACTAGCTTTGGATGCTGCTCACGTAAGCATTTCGGTGGATTCCGGCGTAGCCATTGCCAAAGACATGGCGGATATAATCTTACTAGAGAAAGATCTCAACGTGCTCGTCGCAGGTGTTGAACATGGTCGTCTCACCTTCGGCAACACAATGAAGTATATAAAGATGTCGGTTATTGCTAACTTGGGAAGTACCGTTTCACTCCTCATAGCAAAACTATTCCTTAAATACGAGCCTTTGACTTCTAGACAGCTTCTTACACAGAATTTCATGTACAGCCTCGGACAAATCGTTATACCTTGGGACAAAATCGGCGAAGAATATTTAAAAACTCCTCATAAGTGGTCGGAACGAGGCTTACCTATGTTCATATTATGGAATGGTCCAGTATGCACATTATGTGATATGGCAACACTTTTGTTTCTTTTGTTCTATTACAAAGCTTATGATGATGTGAATGAGAATTTTTTTCATTCAGCTTGGTTCATTGAGGGTCTTCTCATGCAAACTCTAATTGTTCATTTGATGAGGACTGAGAAAATTCCTTTCATACAAGATATTGCTTCTTGGCCAGTGATTTTTTCTACTCTTTTGATATCTTCAATTGGAATTGCAATTCCATTCACTCCTATTGGGAAGGTTATGGGATTTACAATTCTACCCCTCTCCTATTTTGGATTTTTGGCTCTTATTTTTCTAGGATATTTTACAATTGGTCAAGTGGTTAAGAGACTTTACATATTGGTTTATAAGAAATGGCTTTGA 2988 0.3865 MHTLIFSLFTFHSNFHFQQHVSLFFFSQFSFMYYHISFSSSLIIISIHMGRTKVSTLFPSNNNHHYSLPLSNTIHQTLVNKPNSQKNRFPFSVLEFLRRFIYGRKVDGGSRTEEEEKVYSWLYTLAQSEKNMVFEYVRSTERGLSFTEAERRLQENGRNVPLEYSFPSWWHLLWNAFFHPFNMILIVLSSMSFIASDYPNGFIMFILVFISVILRFCLEHKSSKAAMKLSEFLRCPIKVQRCAGRIEQKELIVQVDHKDVVPGDIVIFEPGDLFPGDVRLLSSKHLVVSQSSLTGESWATNKTSDVREDHNTPLLDLRNICFMGTNVVSGTGTGLVISTGSNTYMSTMFSKIGKKKPPDDFEKGLRWIFYMLISVMLVVVTIMFVTDYTTSHNLSKSVLFAISVASVLNPQMLPLIINTCLAKGALAMAKDRCIVKSLTTIREMGSMDILCIDKTGTLTMNHAILVNHLDGRGLPRERVLCYAFLNSYFKTEQKYPLDDAIQAHVYSNGFKFQPSKWKKIDEIPFDFIRRRVSVMLETDDKHSQFFGRLMVTKGALLEVINVCSFIENFDTNEITTISSDDFQRILNLSEELSNEGLRVIAVAIKKLGMQKTCETSNGSKSGADDSERDMIFLGLITFFDPPKDSAKEALWCLAEKGVKAKVLTGDSLSLTTRICREVGISTTHVITGPELEEFDQETFHETVKRATVLARLTPTQKLRVVQSLQTIGNHVVGFLGDGVNDSLALDAAHVSISVDSGVAIAKDMADIILLEKDLNVLVAGVEHGRLTFGNTMKYIKMSVIANLGSTVSLLIAKLFLKYEPLTSRQLLTQNFMYSLGQIVIPWDKIGEEYLKTPHKWSERGLPMFILWNGPVCTLCDMATLLFLLFYYKAYDDVNENFFHSAWFIEGLLMQTLIVHLMRTEKIPFIQDIASWPVIFSTLLISSIGIAIPFTPIGKVMGFTILPLSYFGFLALIFLGYFTIGQVVKRLYILVYKKWL 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 793 808 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 811 822 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 863 879 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 485 498 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 898 919 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 948 969 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 364 380 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 PRINTS Magnesium-transporting ATPase signature 843 856 IPR006415 GO:0015444|GO:0015693|GO:0016020
Trre7g04963 995 SUPERFAMILY HAD-like 627 783 IPR036412 -
Trre7g04963 995 Gene3D - 448 772 IPR023214 -
Trre7g04963 995 SUPERFAMILY Calcium ATPase, transduction domain A 250 350 IPR008250 -
Trre7g04963 995 Pfam Cation transporter/ATPase, N-terminus 133 190 IPR004014 -
Trre7g04963 995 SFLD C1.7: P-type atpase like 433 785 - -
Trre7g04963 995 Gene3D - 198 945 - -
Trre7g04963 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 992 IPR023298 -
Trre7g04963 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 453 459 IPR018303 -
Trre7g04963 995 SMART Cation_ATPase_N_a_2 124 197 IPR004014 -
Trre7g04963 995 Pfam E1-E2 ATPase 252 430 - -
Trre7g04963 995 NCBIfam HAD-IC family P-type ATPase 206 488 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre7g04963 995 NCBIfam HAD-IC family P-type ATPase 697 813 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Trre7g04963 995 PANTHER CATION TRANSPORTING ATPASE 135 985 - -
Trre7g04963 995 Pfam haloacid dehalogenase-like hydrolase 447 748 - -
Trre7g04963 995 Gene3D - 235 339 - -
Trre7g04963 995 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 444 642 IPR023299 GO:0000166
Trre7g04963 995 Gene3D - 463 639 IPR023299 GO:0000166
Trre7g04963 995 SFLD p-type atpase 433 785 IPR044492 -
Trre7g04963 995 NCBIfam magnesium-translocating P-type ATPase 116 994 IPR006415 GO:0015444|GO:0015693|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04963 Trre-Chr7 56722559 56727433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04963 142 858 Primary Pumps ATPases(2) AT1G10130 26.707 1.38e-63 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04963 K01531 - gmx:100795153 1568.52