Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04948 ATGTATATTGGCTCAGGAAACTTTGGTGTTGCAAAACTTGTAAGGGAAAAATGGAGTGATGAGTTATATGCAGTCAAGTTCATTGAAAGAGGCTCTAAGATTTATGAGCACGTGCAAAGGGAGATTATTAATCACAAGTCCTTGAAGCATCCCAATATTGTTAGATTTAAAGAGGTGTTGGTTACTCCAACTCATTTAGCAATAGTGATGGAATATGCTGCTGGTGGAGAATTGTTTGAAAGAATTTGTAGTGCTGGTAGATTCAGTGAGGATGAGATTCTAGAAAACAGTAATTAG 297 0.367 MYIGSGNFGVAKLVREKWSDELYAVKFIERGSKIYEHVQREIINHKSLKHPNIVRFKEVLVTPTHLAIVMEYAAGGELFERICSAGRFSEDEILENSN 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04948 98 Gene3D Phosphorylase Kinase; domain 1 1 72 - -
Trre7g04948 98 Pfam Protein kinase domain 3 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04948 98 ProSitePatterns Protein kinases ATP-binding region signature. 3 26 IPR017441 GO:0005524
Trre7g04948 98 SUPERFAMILY Protein kinase-like (PK-like) 2 94 IPR011009 -
Trre7g04948 98 ProSiteProfiles Protein kinase domain profile. 1 98 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04948 98 PANTHER SERINE/THREONINE KINASE 3 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04948 Trre-Chr7 56546586 56552328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04948 3 92 CBL-interacting serine-threonine protein kinases AT2G26980 39.362 4.13e-18 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre7g04948 Pkinase 2.4e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04948 K14498 - mnt:21402711 169.088