Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04926 ATGGCTCCCAGTTTATATATCCCTGCCCTTTTCTACTTGTCCTTAATTTTCTTCACTATCCCTGCTAATTCCATTTACTTCAAATATTCCAGTTTTAGTCTTAGTGATGCAAACTTAGTGTACCAAGGTTCTGCAGCACCTCGTGATGGCGAAGTTGATTTCAACATCAATAGACAATATTCATGTCAACTTGGAAGAATCTTGTATTCCGAAAAGGTCTTACTATGGGACTCAAACACAAATGAACTCACTGACTTCACAACTCGTTACAGTTTCATGATCAACACTCAAAATAGATCATCATATGGTCATGGTCTTGCCTTCTTCTTGGTTCCTTTTGGATTTGAAATCCCACTCAATTCTTATGGTGGCTTTATGGGCCTATTTAACACAACAACAATGGTTTCGTCTAGTAACCAAATTGTTCATGTGGAGTTTGATTCTTTAGCAAACGGTGAATTTCGCGAGACAACAGGACATGTCGGAATCAACAATAATTCAATCATATCATCAATCACGACACCATGGAATGCCAGCATACATAGTGGAGACACTGCTGATGTATTGGTTAGCTACAATTCAACAACCAAGAATTTAACTGTATCTTGGAAATACCAACTCACTACTGATCCTCAAGAAAATAATAGTCTTTCGTATTCGATTGATTTAATGAAAGTTATGCCTGAATGGATTACTGTTGGATTTTCAGCTACAACAAGTCATGTTGGGGAATTAAATTTTCTTTTGTCATGGGAATTCAACTCCACTTTGCAAAAAAGTGGTGATAATAATACAAAAGAGACAGGATTAGTTATAATACTAACGGTCTCTGGTGTGGCTTTAGTAGTGGGAGCAGTAGCAGCATATGCGTTACTTTGGTGGAAAAGAAAGAGAAGTGATAGGCAAAAGGAAGAGGCTATGCATTTAAGATCAATGAATAATGACCTTGAAAGAGAAGCAGGGCCAAGGAGTTTTAATGTTAAGCTTGGTGACTTTGGGTTGGCTAAGCTAATGGACCATGAGATTGGGCCCCAAACAACCGTCGTTGCCGGAACCTTAGGCTATATGGCTCCAGAATATATAAGTACAGGTAAGGCCAGCAAAGAGTCTGATGTCTATAGTTTTGGGGTTGTTGCCTTGGAGATTACAACTGGAAGGAAAGCTGTTGAAGTTATGAGTGACATTGATGGAGAGAAGGGATTGATTGAGTGGGTATGGGATCATTACGGAAGAGGGGAACTATTTGTGGCCATGGATGGAAATTTATTGAAGAATTTTGATGAGAAACAAGTAGAATGTTTGATGATTGTTGGTCTTTGGTCTGCTCATCCTGATGTAAATCTTAGACCGTCGATTAAACAAGTTACTAAAGTGCTTAATTTTGAGGCTGCTCTTCCAAATCTTCCCCCAAAGAAGCCTATTGCAACCTATCACGCTCCTCCACCGGTTGTAAGCTCGGTTGGAGTTTCCATAACCACAAGCCTTCAAGATGGTCGTTAA 1500 0.3933 MAPSLYIPALFYLSLIFFTIPANSIYFKYSSFSLSDANLVYQGSAAPRDGEVDFNINRQYSCQLGRILYSEKVLLWDSNTNELTDFTTRYSFMINTQNRSSYGHGLAFFLVPFGFEIPLNSYGGFMGLFNTTTMVSSSNQIVHVEFDSLANGEFRETTGHVGINNNSIISSITTPWNASIHSGDTADVLVSYNSTTKNLTVSWKYQLTTDPQENNSLSYSIDLMKVMPEWITVGFSATTSHVGELNFLLSWEFNSTLQKSGDNNTKETGLVIILTVSGVALVVGAVAAYALLWWKRKRSDRQKEEAMHLRSMNNDLEREAGPRSFNVKLGDFGLAKLMDHEIGPQTTVVAGTLGYMAPEYISTGKASKESDVYSFGVVALEITTGRKAVEVMSDIDGEKGLIEWVWDHYGRGELFVAMDGNLLKNFDEKQVECLMIVGLWSAHPDVNLRPSIKQVTKVLNFEAALPNLPPKKPIATYHAPPPVVSSVGVSITTSLQDGR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04926 499 PANTHER - 57 316 - -
Trre7g04926 499 SUPERFAMILY Protein kinase-like (PK-like) 324 480 IPR011009 -
Trre7g04926 499 ProSiteProfiles Protein kinase domain profile. 174 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04926 499 CDD lectin_legume_LecRK_Arcelin_ConA 25 257 IPR001220 GO:0030246
Trre7g04926 499 Gene3D Transferase(Phosphotransferase) domain 1 305 480 - -
Trre7g04926 499 Pfam Protein kinase domain 326 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04926 499 FunFam Lectin-domain containing receptor kinase A4.3 322 479 - -
Trre7g04926 499 Coils Coil 299 319 - -
Trre7g04926 499 Gene3D - 22 280 - -
Trre7g04926 499 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 266 IPR013320 -
Trre7g04926 499 Pfam Legume lectin domain 26 266 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04926 Trre-Chr7 56297679 56299622 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04926 324 478 Receptor kinase-like Gene Family AT5G10530 67.516 4.39e-66 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Trre7g04926 Lectin_legB 4e-61 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04926 - - jre:109003378 335.109