Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04917 ATGTCTCATAGCGATCTTGAAAAACTTTGGGAGGGGGATCAGGTTAAGGATTTACCGAATTTGAAAAGGCTTAACCTAAGTTATTCTAAGAAGCTGATAGCAGTTCCAGATCTTTCTTTCTCTCCAAATATTGAAGAATTAATTCTTAGAGATTGTGTAAGTTTGATACAAGTTTACTCTTCTAGCTTCCTCAACAACCTTTACATTTTATGTATAGACGGTTGTACCGAACTCAAGAGTATAAATATTCCTAGCAATATTCTATCAAGATCATATGGATTAGTGGCTCTCGGTGATTGTTACAACCTTGAAACACTTTTAATCAGCAGTAGAACTGATCATGTGGTTCAATCATATAAATTTACTCATTTTTATAGATATTTTAAGCTCGAAAGAATGCAAAAATATTGGGGTCAATTATACTTCTACAGTGAAATGAGAATAAAGATGAATGACGATGGGGATTTGAAGATTCGGGAATCATTTTCAAATAATGTAACTAGTATCAATTATTTTTATTGGTTAGATATTTCGAATTGTGAGTCCCTAACATGCCTACCAGCAGAACTTTTAAATTTGAAGTTTCTAAGAAGACTTTCTCTGGATGGTTGTTTAAAGTTGGAGGAGTTACCTGAAATCAAGGAAACTATGGAAAATCTAAAAGTGCTCATCTTAAACAGAACAGCAATAAAAGAACTACCTTCATCCTTACACCGTTTGGTCGGGCTTGTAAAATTGAGCTTGAAAAGTTGCACGAAGCTTAAGACTATTCCATCTTCCATTGGAAATCTCAGTCTTCTAACCCATCTTGATTGTTCTGGCTGTTGCAGATTAACAGAAATCCCAAATAACATTGGTTGTTTGTCATCCTTGACCGAACTTTCACTGGAAGGAAGCAGTATTTTGAACCTTCCTGAGAGTATGGCTAATCTCTCAAGTTTGAGTTCACTTAATTTAAATGGTTGCAAATTGCTTGAATGTGTTCCGAAGCTTCCACCAAATCTAACCAAAGTTCAGTCATTTAATTGCCCTGCCATTAAGAGAATGGTGCTAAATTCAAGGTTGGGGAGACTCATGTCTGATTCCAAAAAAGGTACTTATGTATTTGGTCTCACCAATAGTCAAGAACTAGATGCCACTGCTAGAAATAATGCTGTAGGCAAAGCACGTATTAAGATCACTGATGGATATAGGTCAGTGTTCTTCTGTTTTCCAAGGAGTACAGTTCCTCGCTGGATCCATTACTGTTGCCAGGAAGATTCAGTAACTATGAAAGAAGATTCTCCAAATTTGTGCAGTCAAAATAGGCTAATTGGTTTTGCTTTGTGTGCTATTATGGATGGCATGAGAACCAATGTTGGATTTAGATACAATTTTAGATTTATATCAGATGGTGAAATATACTCTTATAACCACTTTATGCCTGCCCACAATTTGTATAGGAATAGTTCTCCTCTATTACTATGGAAGCATCAATTAGACTTAGAAGCAATTGGAAACAAGCTCTTTCATGCCCAAAACTTCACTTTTCAGTTTCAATCAGACTTCAAAGTGAAAGAATTCGGAATGTGTCCTATGTATACCAAAAGCATTGAAGAGCCTAGTGGGAGCAATGCTGCAGAATAA 1626 0.3585 MSHSDLEKLWEGDQVKDLPNLKRLNLSYSKKLIAVPDLSFSPNIEELILRDCVSLIQVYSSSFLNNLYILCIDGCTELKSINIPSNILSRSYGLVALGDCYNLETLLISSRTDHVVQSYKFTHFYRYFKLERMQKYWGQLYFYSEMRIKMNDDGDLKIRESFSNNVTSINYFYWLDISNCESLTCLPAELLNLKFLRRLSLDGCLKLEELPEIKETMENLKVLILNRTAIKELPSSLHRLVGLVKLSLKSCTKLKTIPSSIGNLSLLTHLDCSGCCRLTEIPNNIGCLSSLTELSLEGSSILNLPESMANLSSLSSLNLNGCKLLECVPKLPPNLTKVQSFNCPAIKRMVLNSRLGRLMSDSKKGTYVFGLTNSQELDATARNNAVGKARIKITDGYRSVFFCFPRSTVPRWIHYCCQEDSVTMKEDSPNLCSQNRLIGFALCAIMDGMRTNVGFRYNFRFISDGEIYSYNHFMPAHNLYRNSSPLLLWKHQLDLEAIGNKLFHAQNFTFQFQSDFKVKEFGMCPMYTKSIEEPSGSNAAE 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04917 541 Pfam C-JID domain 404 532 IPR045344 -
Trre7g04917 541 Gene3D Ribonuclease Inhibitor 1 129 IPR032675 -
Trre7g04917 541 SUPERFAMILY L domain-like 167 345 - -
Trre7g04917 541 Gene3D Ribonuclease Inhibitor 130 354 IPR032675 -
Trre7g04917 541 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 216 361 - -
Trre7g04917 541 SUPERFAMILY L domain-like 13 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04917 Trre-Chr7 56250071 56251989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04917 157 329 WRKY Transcription Factor Family AT4G12020 32.778 1.86e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04917 - - tpra:123916959 384.8