Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04913 ATGTCGAAACCCTGGGGCAACATCGGAGCTTGGGCCGCCGATTCCGAGGCTGCCGAAGCCGAGGAACGTGAAGCCGCGGCTAAGGAAGCTTCCGCCGGGTCGGATAACTTCCCGAGTTTGAAAGAAGCCGTAACTGCTAAGCCGAAGAAGAATAAGAAGATGTCGCTTTCTGAGTTCGCACGTGGCGGTTACTCTTCCGGTGGTGGCGCCACCGATTATCCTCGATTGACACCGGATGAGATGCTTCGTCTTCCTACCGGTCCTAAAGAGCGTTCTGCTGAGGAAATGCAGTTTAACCGTCTCGGTGGTGGTTTTTCCAATTTTGACCGTGGTGGTCGTGGAAGGGATCGTGATGGTGGCTCTGGAGATGCTAATTGGGGTGCTGGAAGAAGATCTTATGGTGGATTTGATGATGAACGTAGGGCTCCGAATTCTAGGGTTTCGGATTTTGATCAGCCTTCGAGGGCTGATGAGGTGGATAATTGGGCTTCGGTGAAGAAGACACTCCCTTCGTTTGATTCCGGTAGGCAGAATCGATATGGGGGTGGTGGTGGTGGCGGTGGAGGTGGTTTTGGTGGTGAATCTAAGGCTGATGGAGTGGACAATTGGGCGGTTGGTAAGAAACCTCTACCTGTTAGATCTTCTGGTTACGGTTATCGTGATTCTGGAACGGAACCAGATCGGTGGTCTAGGGGTTCTGCTGTTGAACCAGATCGCTGGGCCAGAGGTGCACCACGTGAAACGGAGCAGCAGCGACCGAGGTTGGTTTTGGATCCAAGGAAAAGTGATGGTTCTGTGAATGAAGCTCCGGTGGTGAAGACAAATAAGCCGAATCCATTTGGTGCGGCGAGGCCTAGGGAGGAAGTGTTAGCTGAGAAAGGATTTGATTGGAAGAAGCTGGATTCTGAGATTGAGGCGAAAAATAGGCCTACAAGTTCACATTCTAGCAGGCCTTCGAGTGCTCAGTCCAATCGCTCTGAGGGTCCAGATGGTGCGGTGAAACCGAGGCCAAAGGTGAATCCCTTTGGGGATGCCAAACCCAGGGAGGTTTTGCTTAGCGAGCGTGGCAAGGATTGGAGGAAGATTGATCTGGAATTGGAGCATCGTGCTGTTGATAGGCCTGAGACCGTGGAGGAAAAATTATTAAAAGAAGAAATTGATAATTTGAAGAAGGAACTTGAGAAGGAGTCTACAATAAATTCAAATAAGGAATCTACAGATGATGCTGGTGTAGACCAAACTGGTATGCGTGCAATGCTACAAGAGAAAGAAAGGGAGCTGGAACTACTTATCCGTGATTTGGATGATAAAGTTCGTTTTGGGCAGAAAGCTGTTGAAAGGCCAGGTTCGTCAGCAGGAAAGACTGCTGGTTTTTCTGATAGGCCACCATCTCGTTCTGGCTCATTTGAGGATTCTAGAAGTGTGGATTTTACAGACCGGCCTCGATCCCGTGGAACAGGAGATATGTCGATGCGTCCTACTGATGACAGAAGACAATTTCAAGGTAGCAGGGAAAGGGGGTGGTTTTCGAACAACAGAGACTTGAATAGGTCAGGGCCCAAAGAGAGATGGTGA 1575 0.499 MSKPWGNIGAWAADSEAAEAEEREAAAKEASAGSDNFPSLKEAVTAKPKKNKKMSLSEFARGGYSSGGGATDYPRLTPDEMLRLPTGPKERSAEEMQFNRLGGGFSNFDRGGRGRDRDGGSGDANWGAGRRSYGGFDDERRAPNSRVSDFDQPSRADEVDNWASVKKTLPSFDSGRQNRYGGGGGGGGGGFGGESKADGVDNWAVGKKPLPVRSSGYGYRDSGTEPDRWSRGSAVEPDRWARGAPRETEQQRPRLVLDPRKSDGSVNEAPVVKTNKPNPFGAARPREEVLAEKGFDWKKLDSEIEAKNRPTSSHSSRPSSAQSNRSEGPDGAVKPRPKVNPFGDAKPREVLLSERGKDWRKIDLELEHRAVDRPETVEEKLLKEEIDNLKKELEKESTINSNKESTDDAGVDQTGMRAMLQEKERELELLIRDLDDKVRFGQKAVERPGSSAGKTAGFSDRPPSRSGSFEDSRSVDFTDRPRSRGTGDMSMRPTDDRRQFQGSRERGWFSNNRDLNRSGPKERW 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04913 524 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 518 IPR010433 GO:0003743
Trre7g04913 524 MobiDBLite consensus disorder prediction 224 261 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 1 287 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 442 524 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 301 353 - -
Trre7g04913 524 Pfam Plant specific eukaryotic initiation factor 4B 1 507 IPR010433 GO:0003743
Trre7g04913 524 MobiDBLite consensus disorder prediction 133 162 - -
Trre7g04913 524 Coils Coil 417 437 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 311 327 - -
Trre7g04913 524 Coils Coil 379 406 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 472 503 - -
Trre7g04913 524 MobiDBLite consensus disorder prediction 393 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04913 Trre-Chr7 56237282 56241942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04913 1 524 Eukaryotic Initiation Factors Gene Family AT3G26400 53.546 7.33e-154 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04913 - - gmx:100784238 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04913 7 56237282 56241942 Trre7g04913 7 56237282 56241942 ECH