Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04876 ATGTTAGAAACTGGTGCATCACGTGATTCTGAGTTAAGTTTAGAGACTGTAAACTCAATGAGCAGTGAAAGCATTTGCAGCACCAGTTTCAGTCGTCTATCATTCGACCTACTTCCACCTTCTCCAGAAAGTCTTTCCATCAAGCCTCACCGTTCTTCCGATTTCGCATACTCTGCTATCCGTTCCGCCACATTCCATCGCAAATCTGCACTTACTTTCCGTGACTTTCATCTCCTCCGCCGTATCGGCTCCGGCGACATCGGAACAGTTTACCTATGCCGCCTCAGAAACGGAAATGACAAATTCGAAAGCAAAAAAAAAGAAGACGTGTGTTGTTTGTACGCGATGAAGGTTGTTGATAAAGACGCCGTCGCATTGAAGAAGAAATCACAGAGAGCTGAAATGGAGAGAAAGATTCTGAAAATGCTTGATCATCCTTTTCTACCTACACTCTACGCTGAGTTTGAAGCTTCTCATTTCTCTTGCATTGTTATGGAGTTTTGTTCCGGTGGTGACTTGCATTCCCTACGCCACAAACACCCTCATAACCGTCTTCCTCTTTCTTCCGCTAGATTTTATGCGGCTGAGGTATTGGTGGCTATGGAGTACCTTCACATGTTAGGAATCATCTACAGAGATCTAAAGCCTGAGAATGTTTTAGTTAGATCCGACGGTCACATCATGCTTTCAGATTTTGATCTTTCACTTTGCTCTGATGCAATCCCTGCCGTTGAATCATCAGACATTTTACAAGATTCCGCGTTTCCATCAACATTACCCTATACTCGTTCGCGTTCTTTTCCTACTCCATTTACTTGCTTTTCAAACCGGTTATTTAAGTCACGTAAGATTCAAACCATTCAACCGAACCGGCTTTTCGTTGCTGAACCGGTTTCTGCTCGGTCTTGTTCTTTTGTTGGAACACATGAATATGTCTCACCGGAAGTTGCAGCCGGAAACTCACACGGCAACGCCGTAGATTGGTGGTCATTTGGGATATTCATATATGAGCTTATATATGGGTATACTCCGTTTGCAGCTCCATCGAATAAAGCTACGCTGCGTAACATCTTAAAAAAACCTTTAACCTTTCCCACAGCCACACCCTCGAGCACGCTTGAATTTCACGCGCGTGAAATAATATCCGGGTTGCTTAACAAAGATCCAGCTCAACGACTCGGGTCAAAGCGTGGAGCGGCTGACGTAAAGAAACACCCGTTTTTCAAAGGGATTAATTTGGCGTTGATTCGTATGTTGACGCCGCCTGAAGTTCCTGGCTCAAGAAAGCCTAAAACGACGCCGTTGTATAGTGGGAAGAGTAATGGTAGTAGTAAACGGCAACACACGGCGTCGTTTGATGTTTTCTTTTGA 1371 0.4435 MLETGASRDSELSLETVNSMSSESICSTSFSRLSFDLLPPSPESLSIKPHRSSDFAYSAIRSATFHRKSALTFRDFHLLRRIGSGDIGTVYLCRLRNGNDKFESKKKEDVCCLYAMKVVDKDAVALKKKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHSLRHKHPHNRLPLSSARFYAAEVLVAMEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVESSDILQDSAFPSTLPYTRSRSFPTPFTCFSNRLFKSRKIQTIQPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGNSHGNAVDWWSFGIFIYELIYGYTPFAAPSNKATLRNILKKPLTFPTATPSSTLEFHAREIISGLLNKDPAQRLGSKRGAADVKKHPFFKGINLALIRMLTPPEVPGSRKPKTTPLYSGKSNGSSKRQHTASFDVFF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04876 456 PANTHER FLIPPASE KINASE 1-RELATED 19 429 - -
Trre7g04876 456 MobiDBLite consensus disorder prediction 433 450 - -
Trre7g04876 456 SMART serkin_6 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04876 456 Gene3D Transferase(Phosphotransferase) domain 1 301 426 - -
Trre7g04876 456 Pfam Protein kinase domain 302 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04876 456 Pfam Protein kinase domain 76 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04876 456 Gene3D Phosphorylase Kinase; domain 1 74 167 - -
Trre7g04876 456 FunFam protein kinase PINOID 2 74 167 - -
Trre7g04876 456 FunFam serine/threonine-protein kinase D6PK-like 300 426 - -
Trre7g04876 456 Gene3D Transferase(Phosphotransferase) domain 1 168 235 - -
Trre7g04876 456 MobiDBLite consensus disorder prediction 422 456 - -
Trre7g04876 456 SUPERFAMILY Protein kinase-like (PK-like) 55 425 IPR011009 -
Trre7g04876 456 ProSiteProfiles Protein kinase domain profile. 76 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04876 456 FunFam protein kinase PINOID 168 236 - -
Trre7g04876 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04876 Trre-Chr7 56058950 56060432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04876 9 455 AGC Kinase Gene Family AT2G34650 64.989 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Trre7g04876 Pkinase 8.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04876 - - vun:114177159 726.857