Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04865 ATGGCTTTATTTTCTCATTCACATTTTCATATTTTTTCCTTATTAATGATCCTCCACTTTGATTTCAACAACCTTTTGTTTGTTGTATCATCAACCACTCCAAGCATCATCACAGACAAAGAAGCCTTAATCTCATTAAAATCTCAATTAAGTAATAATAATGACACTTCTAGTTCTCACCCATTATCCTCTTGGAGCCATAATTCATCTCCTTGCAATTGGACTGGTGTCCTATGTGACAAGCATAACCAAAGAGTAATTGGTTTAGATCTTTCAGGCTTTGCACTCTCAGGTAACTTAAGTCCTTATATAGGTAACTTGTCCTCTCTTAAATCCCTACAATTGCAGGATAACCAGATCACAGGAATGATTCCTGACCAAATTAGCAATCTATACAGTTTGAGAGTTCTTAATATAAGCTCTAATAGATTAGAAGGAGTGCTTCCTTCAAACCTTACATGCTTAAATAAGCTTAAGATTCTTGATTTGTCCTCAAACAAGATTGTAAGTAGAATTCCCAAAGACATCAGCAGCTTGAAAAAGCTGCAGGCCTTGAAACTTGGAAGGAATAGCCTCTATGGTACAATTCCAGCATCTCTAGGAAATATTTCTTCTTTGAAAAATATAAGTTTTGGCACCAACTCTCTTAGTGGCTGGATTCCTAGTGAATTAGGTAAGTTACATAATTTAATTGAGCTTGATCTTACTCTTAACAATCTTACCGGAACGGTTCCACCAATAATATACAATTTGTCTTCCCTTGTTAACTTGGCCTTAGCTGCAAACTCCTTTTGGGGTGAGATACCTTATGATGTTGGTCATAAACTTCCAAAACTACTAGTTTTCAATTTCTGCTTCAATAAGTTCACAGGTAGAATTCCAGGGTCTTTGCACAACCTCACAAACATTAGGGTCATTCGTATGGCTTATAACCGTTTGGAAGGAACAGTTCCACCCGGTTTAGGAAATCTTCCATTTCTTCACATGTATAATATTGGCTATAACAGGATAGTCACCTCAGGAGTCAATGGTTTGGACTTCATTACTTCATTGACAAATAGCACTCACTTGAAATTTCTAGCAATTGATGGAAATATGCTTGAAGGTGTGATTCCTGAAACCATTGGCAATCTCTCAAAGGAACTCTCAAACTTATACATGGGAGGGAATCGTTTCAATGGAAGCATACCATCTACCATTGGTCGTCTTAGTGGCTTGAAGTTGTTAAACTTGAGCTACAATTCAATCAGTGGTGAGGTTCCAAAGGAGTTAGGCCAGTTAAAGGAACTAGAAGAGCTATATCTTGATGGAAATAAGATATCAGGATCTATTCCGAACTCTTTTGGTAAGCTACTAAACTTAAACAAGATTGATTTGTCAAGAAATGAACTTGTAGGTAAAATACCAATCAGTTTTGGTAATTTGCAAAACCTGATTTGCATGGACTTATCTTGCAACAAACTCAATGGAAACATACCTGTGGAAATCCTCAACCTACCAAATTTGAGCAATGTTTTAAACTTATCAAAGAATTTTTTGAGCGGACCGATACCTGAAGTTGGGAAATTGCCTACCATTGCAACTATTGACTTTTCCAACAACCAATTGTATGGAAACATCCCAAGCTCATTCAGCAGTTGTTTGAGCTTGGAGAAATTGTTTTTGAACAACAATTTGCTTTCAGGTTCCATTCCAAAAGCTCTTGGAGATGTGAGAGGCTTGGAAACTTTGGACTTATCCTCCAACCTACTCTCAGGATCCATTCCTATTGAACTTCAAAATTTGCATGTCCTAAAGCTTTTAAACCTCTCTTATAATGATTTAGAAGGAGTCATTCCTAGTGGTGGGATTTTCCAAAATCTCTCTGATGTCCACTTAGAAGGCAATAAAAAACTATGCTTGAATTTTGCATGTGTGCCTCAAGTCCATAGAAGAACACATGACAGATTATATATCATCATAGCTGTTGTGTTAACAATGGGACTATGTCTCACAATTGGCTTGCTACTATATATGAAGTATACAATGGTTAAGGTAACAGCAACAACAGTGTCTGGACAGCTAAAGCATCAGGCTCCTATGATCTCTTATGACGAGCTTCGCTTGGCAACTGAGGATTTCAGCCAAGAACATTTAATAGGAATTGGGAGTTTTGGATCAGTGTATAAAGGCTATCTGAGTCAGGGAAATACTGTTGCAGTGAAAGTGCTTGACACTATAAGAACAGGTTCTTTAAAGAGTTTCTTTGCAGAGTGTGAGGCTATGAAGTATTCAAGGCATAGAAATCTGGTTAATCTCATCACATCATGTTCTAGTGTTGACTTTAAAAACAATAATTTTTTGGCTTTGGTGTATGAGTATTTAAATAATGGGAGCTTGGAAGATTGGATTAAGGGGAGGAGAAAGTATGAAAATGGAAATGGCTTGAACCTTATGGAGAGAGTGAATATAGCTATAGATGTTGCTTGTGCATTAGATTACCTACACAATGATAGTGAAACTCCTATTGTGCATTGTGATCTAAAACCAAGCAATATTCTCCTGGATGAAGATATGACTGCAAAGGTTGGAGACTTTGGTTTGGCTAGGTTGCTGATTCAAAGATCTACTAATCAAGTTTCTATCAGCTCCACTCATGTTCTAAGGGGTTCAATTGGTTACATACCTCCAGAGTATGGATGGGGAGAGAAACCTTCAACAGCAGGAGATGTATATAGTTTTGGGATAGTGTTACTAGAGCTCTTCTCTGGAAAAAGTCCACAAGATGATTGCTTTACAGGAGGCCTGAGCATAACAAAATGGGTGCAATCAGCACTCAAAACCAAGAATGTTCAAGTCATTGACCCGCAGCTGCTATCTCTCGTTTTTCATGATGATCCTGCTAGAAAAGACCCCAATCTACTAATCCATTGTGTGGATGCAATTATGGGAATTGGCATGTCTTGCACTGTAGACAATCCAGATGACCGCATTGGCATTAGAGTTGCTGTTCGCCAACTAAAAGCTGCATGGGACTCTTATGAAAGAGTCTCATAA 3036 0.3778 MALFSHSHFHIFSLLMILHFDFNNLLFVVSSTTPSIITDKEALISLKSQLSNNNDTSSSHPLSSWSHNSSPCNWTGVLCDKHNQRVIGLDLSGFALSGNLSPYIGNLSSLKSLQLQDNQITGMIPDQISNLYSLRVLNISSNRLEGVLPSNLTCLNKLKILDLSSNKIVSRIPKDISSLKKLQALKLGRNSLYGTIPASLGNISSLKNISFGTNSLSGWIPSELGKLHNLIELDLTLNNLTGTVPPIIYNLSSLVNLALAANSFWGEIPYDVGHKLPKLLVFNFCFNKFTGRIPGSLHNLTNIRVIRMAYNRLEGTVPPGLGNLPFLHMYNIGYNRIVTSGVNGLDFITSLTNSTHLKFLAIDGNMLEGVIPETIGNLSKELSNLYMGGNRFNGSIPSTIGRLSGLKLLNLSYNSISGEVPKELGQLKELEELYLDGNKISGSIPNSFGKLLNLNKIDLSRNELVGKIPISFGNLQNLICMDLSCNKLNGNIPVEILNLPNLSNVLNLSKNFLSGPIPEVGKLPTIATIDFSNNQLYGNIPSSFSSCLSLEKLFLNNNLLSGSIPKALGDVRGLETLDLSSNLLSGSIPIELQNLHVLKLLNLSYNDLEGVIPSGGIFQNLSDVHLEGNKKLCLNFACVPQVHRRTHDRLYIIIAVVLTMGLCLTIGLLLYMKYTMVKVTATTVSGQLKHQAPMISYDELRLATEDFSQEHLIGIGSFGSVYKGYLSQGNTVAVKVLDTIRTGSLKSFFAECEAMKYSRHRNLVNLITSCSSVDFKNNNFLALVYEYLNNGSLEDWIKGRRKYENGNGLNLMERVNIAIDVACALDYLHNDSETPIVHCDLKPSNILLDEDMTAKVGDFGLARLLIQRSTNQVSISSTHVLRGSIGYIPPEYGWGEKPSTAGDVYSFGIVLLELFSGKSPQDDCFTGGLSITKWVQSALKTKNVQVIDPQLLSLVFHDDPARKDPNLLIHCVDAIMGIGMSCTVDNPDDRIGIRVAVRQLKAAWDSYERVS 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04865 1011 Gene3D Ribonuclease Inhibitor 344 641 IPR032675 -
Trre7g04865 1011 Gene3D Ribonuclease Inhibitor 93 343 IPR032675 -
Trre7g04865 1011 Gene3D Ribonuclease Inhibitor 28 92 IPR032675 -
Trre7g04865 1011 Gene3D Transferase(Phosphotransferase) domain 1 788 1010 - -
Trre7g04865 1011 FunFam Inactive leucine-rich repeat receptor-like protein kinase 349 641 - -
Trre7g04865 1011 Pfam Leucine rich repeat N-terminal domain 38 80 IPR013210 -
Trre7g04865 1011 Pfam Leucine rich repeat 381 440 IPR001611 GO:0005515
Trre7g04865 1011 Pfam Leucine rich repeat 549 608 IPR001611 GO:0005515
Trre7g04865 1011 Pfam Leucine rich repeat 109 168 IPR001611 GO:0005515
Trre7g04865 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 836 848 IPR008271 GO:0004672|GO:0006468
Trre7g04865 1011 SMART LRR_sd22_2 107 133 - -
Trre7g04865 1011 SMART LRR_sd22_2 155 181 - -
Trre7g04865 1011 SMART LRR_sd22_2 427 456 - -
Trre7g04865 1011 SMART LRR_sd22_2 227 253 - -
Trre7g04865 1011 SMART LRR_sd22_2 571 592 - -
Trre7g04865 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 788 1011 - -
Trre7g04865 1011 SMART LRR_typ_2 475 499 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 107 130 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 227 251 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 571 594 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 155 179 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 403 426 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 427 450 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 131 154 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 300 324 IPR003591 -
Trre7g04865 1011 SMART LRR_typ_2 595 620 IPR003591 -
Trre7g04865 1011 FunFam LRR receptor-like serine/threonine-protein kinase EFR 678 787 - -
Trre7g04865 1011 FunFam Receptor protein kinase CLAVATA1 35 197 - -
Trre7g04865 1011 Gene3D Phosphorylase Kinase; domain 1 686 787 - -
Trre7g04865 1011 SUPERFAMILY L domain-like 38 338 - -
Trre7g04865 1011 CDD STKc_IRAK 713 990 - -
Trre7g04865 1011 ProSitePatterns Protein kinases ATP-binding region signature. 713 735 IPR017441 GO:0005524
Trre7g04865 1011 Pfam Protein kinase domain 708 922 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04865 1011 FunFam Putative leucine-rich repeat receptor-like protein kinase family protein 237 344 - -
Trre7g04865 1011 ProSiteProfiles Protein kinase domain profile. 707 1010 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04865 1011 PANTHER OS04G0122200 PROTEIN 225 995 - -
Trre7g04865 1011 SUPERFAMILY Protein kinase-like (PK-like) 688 1000 IPR011009 -
Trre7g04865 1011 SMART serkin_6 707 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04865 1011 SUPERFAMILY RNI-like 185 614 - -
Trre7g04865 1011 ProSiteProfiles Leucine-rich repeat profile. 157 180 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04865 Trre-Chr7 55962835 55966311 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04865 38 1011 Receptor kinase-like Gene Family AT3G47570 40.841 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Trre7g04865 Pkinase 2.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04865 - - gmx:100783512 1553.88