Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04838 ATGGAGAAGTATGAGGAAGTGAAAGATATTGGAGATGGGAATTATGCAGTTGTGAAGCTTATTCGCCACATACACACTAAATCCTTGTTTGCTGTCAAGTACATCCCAAGAGGCCACACGGTTGATGAAAGGGTGGCAAGGGAAATTATAAACCATAGATCTCTTCATCATCCAAATATTATTCAGTTCAAGGAGGTTTTTCTGACTCCAACACATATTGCAATAGTTATGGAGTATGCAGCTGGTGGTGATCTATTTGATTATGTTTGCAGTCAGGGGACATTAAGTGAAGATAAGGCTAGGTATGTCTTCCAACAACTAATTTCAGGGGTTAGTCATTGTCATGACATGGAAATTTGTCACCGAGATTTAAAGTTGGAAAACACATTATTAGACGGAAAGCGTATTAAGATTTGTGATTTTGGCTTTTCTAAGTCGTATCTATTACATTCGACGCCAAAATCAAGGATCGGAACTCCTTCCTATATTGCACCAGAGATTTTTTCTGGTAAAGAATACAATGGAAAGTTAGCAGATATATGGTCATGTGGAGTGATGTTGTATATAATGCTAGTGGGAGAATTGCCATTTGGGGACCAAAAGGATTTGCAAAATCTCAAGAAAACAATGAGTAAAATTATGCTTGTTCAATACAAGATCCCGGATACCGTTCACATTTCTCAACATTGTAGAAATCTAATATCTCGTATTTTTGTGGCAAATCCAATGAAAAGAATCAGCATGAGAGAAATTAAGTCCCACCCATGGTTTTTAGAGAACTTGCCTAAGGAATCAATAAAAGAAGCTCAAGATGTGAACTACACAAAAGAAAATCCAATAACTTCTCTTCAAAGTATAGAAGAGATAATGAACATTGTTGAGGAAGCTAAAATTCTAGCTACAACTTCTAGTTCAGATCAATTGGAGGATTTAACTGAGACATTAAAGAAGATGTAA 957 0.3626 MEKYEEVKDIGDGNYAVVKLIRHIHTKSLFAVKYIPRGHTVDERVAREIINHRSLHHPNIIQFKEVFLTPTHIAIVMEYAAGGDLFDYVCSQGTLSEDKARYVFQQLISGVSHCHDMEICHRDLKLENTLLDGKRIKICDFGFSKSYLLHSTPKSRIGTPSYIAPEIFSGKEYNGKLADIWSCGVMLYIMLVGELPFGDQKDLQNLKKTMSKIMLVQYKIPDTVHISQHCRNLISRIFVANPMKRISMREIKSHPWFLENLPKESIKEAQDVNYTKENPITSLQSIEEIMNIVEEAKILATTSSSDQLEDLTETLKKM 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04838 318 FunFam Serine/threonine-protein kinase SRK2A 80 265 - -
Trre7g04838 318 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04838 318 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Trre7g04838 318 SUPERFAMILY Protein kinase-like (PK-like) 2 279 IPR011009 -
Trre7g04838 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Trre7g04838 318 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04838 318 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04838 318 Gene3D Transferase(Phosphotransferase) domain 1 80 264 - -
Trre7g04838 318 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Trre7g04838 318 PANTHER SERINE/THREONINE KINASE 2 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04838 Trre-Chr7 55741970 55744494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04838 3 273 CBL-interacting serine-threonine protein kinases AT2G26980 39.576 2.50e-61 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Trre7g04838 Pkinase 1.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04838 K14498 - gmx:100812259 444.891