Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04837 ATGGAGTCTATTTTTGTGCTTCTCATGATTTTTGTTGTAGCTACAAATTCAATCTCAGTCTCAGCAGCACCCTCTTCAGTGTGTCCAGTTGACATGAATTATGTGTTAACAGTTCCTTGGAACACTTCAACCTGTCTTAACTTTGATCAACACTTACAATCACGAAACAAAGCACAAACAAATCTATGTTGTCAAACTTTGTTGTCCCTTTTTGGTATAGCACTATCACAAAACCTCAATAAAAACTCTCTTTTCCAACTTCCAAACCTCTCTATCTCAACTTCATGCCTTCAAGATTTCCAAACTAAGCTAAATTCCCTTTCACTTCATAATGATCTTGTGTCTTCATGCTTTGAACCACTTCAATTTGTTATCACTCCTAACATATGTGCTAGTATTCAATCTAAACAAGATTGGTACAACAAAGTTGGTTCTGCATCATTGTTCAACACTTCTTGTAAACAAGACCTTAGTGTTTCTACTAATTGTGATGCATGTGTTAATGAAGGACTCAAGGTTCAACAGAAGCTGAATCAAATTGATGGTAATAGTTCACATTCTAAAGATTGTTTTTACTTCACTATACTTTATATTTCTGGAGTTGTGAATGATTTTGGACCTCAAAGCAGTGGTGTTATGTCTTGCATTCTTGAATTGCCTCTTAATTCTCGAGTCGGTTCGAGAAAAAAGAGCCATCATGCTGTTGTTTTTGGTTTAATTGGAGCAGCAGTTGCATTCATGGTTATCATGTTTTCTTTGTTTGGTTTCTATTTTTGGTACACTAAGGTGCTAAAGAGAAAAAGTGCTGAAAATTTTCTAGATTATGCAGCTGAACCAATGGAACAAAGGCCTGGCCGAAAAATTAGGCCGAAAACAGGATCAATTTGGTTCAAGTTTGAAGACCTTGTGAAGGCTACTAACAATTTTTCACTCCAAAATTTTATTGGTAAAGGTGGATTTGGGATAGTTTACAAAGGCATTCTATCTGATAACACAACTGTTGCAGTTAAAACCATGGAAGTAACCGATTTTCAAGGAGATGATGAGTTCTACACTGAAGTGGAGATTATTAGCAACTTGAAGCACCGGAATCTAGTTCCGCTAAGAGGGTGTTGCGTGGTCGATGAGGATCATAATCAAGAACACAGAAATAGGTATCTTGTTTATGATTACATGCCAAACGGTAACCTCGAAAATCATCTCTTTCCATCCATGGAAAAGGAGAAAAGATCATTGACTTGGCCTCAAAGAAAAAACATAATCTTGGATGTGGCGAACGCGTTGGTTTATTTGCACTTTGGAGTTAAACCTGCTATTTATCACAGAGATATCAAAGCCACAAATATACTACTTGATGCAGATATGAGAGCAAGGGTTGCAGATTTCGGTCTAGCCAAAGAAAGCAGTGAAAGTAAGTCTCAGTTAAACACTAGAGTAGCCGGAACTTATGGATATCTTGCACCAGAATATGCACTTTATGGTCAACTAACTGAGAAAAGTGATGTGTATAGTTTTGGTGTAGTAATTTTGGAGATTATGTGTGGAAGAAAAGCTCTTGAGTTATCTTCATCAGGAACAACTAAATTCTTGATCACAGATTGGGTTTGGTCATTAATGAAATATGGTAACATAGCAGAAGCTTTGGATGTTTCTATCTTGGTGGATGATGGAAAATCTAATAGTAGAAATATAATGGAGAGGTTTTTGTTGGTTGGAATTTTGTGTTCTCATGTTATAGCTATTTCAAGGCCAACAATTTTGGATGCTTTGAAGATGTTAGAAGGTGATATTGAGGTTCCATCAATTCCTGATAGGCCAATGAGTCTTGAGCACCAGATCAATATGTTTACTAATGGTAATTCAGTAGAAATGTGA 1875 0.3643 MESIFVLLMIFVVATNSISVSAAPSSVCPVDMNYVLTVPWNTSTCLNFDQHLQSRNKAQTNLCCQTLLSLFGIALSQNLNKNSLFQLPNLSISTSCLQDFQTKLNSLSLHNDLVSSCFEPLQFVITPNICASIQSKQDWYNKVGSASLFNTSCKQDLSVSTNCDACVNEGLKVQQKLNQIDGNSSHSKDCFYFTILYISGVVNDFGPQSSGVMSCILELPLNSRVGSRKKSHHAVVFGLIGAAVAFMVIMFSLFGFYFWYTKVLKRKSAENFLDYAAEPMEQRPGRKIRPKTGSIWFKFEDLVKATNNFSLQNFIGKGGFGIVYKGILSDNTTVAVKTMEVTDFQGDDEFYTEVEIISNLKHRNLVPLRGCCVVDEDHNQEHRNRYLVYDYMPNGNLENHLFPSMEKEKRSLTWPQRKNIILDVANALVYLHFGVKPAIYHRDIKATNILLDADMRARVADFGLAKESSESKSQLNTRVAGTYGYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALELSSSGTTKFLITDWVWSLMKYGNIAEALDVSILVDDGKSNSRNIMERFLLVGILCSHVIAISRPTILDALKMLEGDIEVPSIPDRPMSLEHQINMFTNGNSVEM 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04837 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Trre7g04837 624 Pfam Protein kinase domain 312 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04837 624 Gene3D Phosphorylase Kinase; domain 1 277 391 - -
Trre7g04837 624 SUPERFAMILY Protein kinase-like (PK-like) 291 594 IPR011009 -
Trre7g04837 624 SMART serkin_6 309 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04837 624 CDD STKc_IRAK 315 595 - -
Trre7g04837 624 ProSiteProfiles Protein kinase domain profile. 309 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04837 624 FunFam Receptor-like serine/threonine-protein kinase At4g25390 275 391 - -
Trre7g04837 624 Pfam SPARK 24 191 IPR043891 -
Trre7g04837 624 Gene3D Transferase(Phosphotransferase) domain 1 392 612 - -
Trre7g04837 624 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 392 601 - -
Trre7g04837 624 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Trre7g04837 624 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04837 Trre-Chr7 55739119 55740993 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04837 20 611 Receptor kinase-like Gene Family AT1G11050 58.389 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Trre7g04837 Pkinase 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04837 - - gmx:100788367 797.734