Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04829 ATGGGTAAAAAGAGCAAGAGCTTTTTCTCCTTTCGCCGTCGCTCCAAAAAACTACCACCACCACCACAGCCTCCGCCGTCTACACTCGAAATCACCGGTTCACCGTCGGAAAATCCATTAGTCCTTAAACCGAAGAAAAAAACCGGCGGAGCCAAATTATGGATGCGTTTCGACCGCTCCGGCACGTCAGAGCTCGTCGAGTGGGAGAAAAACACGATCATCCGCCATGCCGCTATTCCCGCCAGAGACCTAAGGATTCTCGGTCCTGTCTTCTCTCATTCCTCCAATATCCTCGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAGTTTATAAAAGCAATAGTAACAGCTGAAGAAGTTTTATTGCTTGATCCATTAAGACAAGAGGTTCTTCCATTTGTTGAACAATTGAGGCAACAACTTCCACATAAGACTCAACCTAAGCTTCTTGGTGGTGGTGATGATAATGTGACTGAAACTGCTGAAGGTTTACAATCCGAACTTCCGCTTCCGTTCGAGTTTCAAGTGTTGGAAATTGCTTTGGAAGTTGTTTGTACTTATTTGGATTCAGATGTTGCTGACCTTGAAAGAGGTGCTTATCCTGTATTGGATGAATTGGCTAGGAATGTTAGTACTAAGAATCTTGAACATGTTAGAAGCTTGAAGAGTAATCTTACTCGATTGCTCGCACGCGTGCAGAAGGTACGCGATGAAATTGAACATCTATTAGATGACAATGAAGACATGGCTCAACTATATTTGACAAGGAAGTGGTTGCAAAACCAACAAGTTGAGGCTCATTTGGCAGCCACAACCCCGAATAACCTTTCAGTTGTTCGACGGCTTAATTCTACCAGAAGTGGAAGTCTTGTGACTAGCAATGATGATAATGATGTGGAGGACTTGGAGATGTTGCTTGAAGCATACTTTATGCAATTGGATGGAACTCGTAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGATTATGTCAACATCCAACTTGATAACCATAGGAATGAACTTATCCAACTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTATTGAGACTTTGATAGCCGGTGCATTTGGTATGAACATTCCATGTACATTATACAAGACAGAAGGAATATTTTGGCATGCTGTTGGGATTATGACTGCAGTTTCCATAGTGATTTTCATGCTTGTTTTAGCGTATGCTAAATGGAAAAAGTTGTTAGGTTCATAA 1245 0.4193 MGKKSKSFFSFRRRSKKLPPPPQPPPSTLEITGSPSENPLVLKPKKKTGGAKLWMRFDRSGTSELVEWEKNTIIRHAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKTQPKLLGGGDDNVTETAEGLQSELPLPFEFQVLEIALEVVCTYLDSDVADLERGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQVEAHLAATTPNNLSVVRRLNSTRSGSLVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAIETLIAGAFGMNIPCTLYKTEGIFWHAVGIMTAVSIVIFMLVLAYAKWKKLLGS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04829 414 FunFam Magnesium transporter MRS2-1 42 125 - -
Trre7g04829 414 FunFam magnesium transporter MRS2-4 129 345 - -
Trre7g04829 414 Gene3D Magnesium transport protein CorA, transmembrane region 352 410 - -
Trre7g04829 414 MobiDBLite consensus disorder prediction 1 43 - -
Trre7g04829 414 Gene3D - 42 125 - -
Trre7g04829 414 CDD Mrs2_Mfm1p-like 54 411 IPR039204 -
Trre7g04829 414 Gene3D Magnesium transport protein CorA, transmembrane region 127 345 - -
Trre7g04829 414 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 350 401 IPR045863 -
Trre7g04829 414 Pfam CorA-like Mg2+ transporter protein 291 402 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre7g04829 414 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 41 412 IPR039204 -
Trre7g04829 414 Coils Coil 218 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04829 Trre-Chr7 55692369 55695063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04829 43 414 MRS2 Gene Family AT3G58970 72.468 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04829 K16075 - gmx:100812561 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04829 7 55692369 55695063 Trre5g03182 5 27415583 27417313 PCT