Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04828 ATGGCAAATTCAAAGAGCTCATCGGGTATTAGAAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTACTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTCCTAAATGAGCCAGATACGCCTGTCAGAAGGGGTGGTCACAGGCGTTCATCAAGCGATTCTTTTGCATATATCGACACTATTAATGCATCTAACATCGGTTATGCCGATCATGATGAGTATAAATATAAGAATGTCTTATCTATTCCAGCATGGTCACCTCCAGACTTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCTGAAATGAATCTAGCAAAACAAAAGAACAGATCATGGGACTCTTTTTCAAATGTGAGTGGTGTTCCATCTGGCAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCGAGCCCAAGTACACTATATGAAGCAGATCGGATCCTTCCGACTGCAAATGAAAATCATGATTCAGTAGAATCTAGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGACGGTTTACATGCAAAGTCACCTGCTTCTGAAACAGATTCAAAGCGTGCTAAACAACAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCTGAGCTGGAAAGAAATGTACAGGCTTTACAGGCAGAAGGAACTGAAGTATCAGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAACATCTGCAGCAGTCACAACAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 1143 0.4208 MANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQAYADYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDTINASNIGYADHDEYKYKNVLSIPAWSPPDFDRNKDARHASMYAEMNLAKQKNRSWDSFSNVSGVPSGRDSVAFQRSGSPSPSTLYEADRILPTANENHDSVESSLQDIKSSFERKDGLHAKSPASETDSKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQHLQQSQQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04828 380 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 22 362 IPR044797 -
Trre7g04828 380 MobiDBLite consensus disorder prediction 327 346 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 43 100 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 327 380 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 224 244 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 1 29 - -
Trre7g04828 380 CDD bZIP_plant_RF2 239 285 IPR044759 GO:0003700|GO:0006355
Trre7g04828 380 SMART brlzneu 235 294 IPR004827 GO:0003700|GO:0006355
Trre7g04828 380 SUPERFAMILY Leucine zipper domain 246 288 IPR046347 GO:0003700|GO:0006355
Trre7g04828 380 Coils Coil 250 305 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 56 70 - -
Trre7g04828 380 MobiDBLite consensus disorder prediction 224 246 - -
Trre7g04828 380 Gene3D - 239 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04828 Trre-Chr7 55684789 55687679 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04828 24 309 bZIP Transcription Factor Family AT2G42380 30.097 6.17e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04828 - - cam:101495568 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04828 7 55684789 55687679 Trre7g04828 7 55684789 55687679 ECH