Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04827 ATGGCAAATTCAAAGAGCTCATCGGGTATTAGAAATTTGGTGTATACTGGTCCTGGAAAGCATGCTCATGCTCTGCTTCCTCCCAAAAGCCCATTTCCTACTATTTCTCAAGCATATGCTGATTATGTCTCAAATCCTACAATTGGTTCAAAGCCTGTTAATAAGCCAAGAGAAGGAAACTCTCACCACCAACGTACTTCATCTGAGAGCCATCTTATTGAGGAGCAGCCATCATGGCTTGATGATCTCCTAAATGAGCCAGATACGCCTGTCAGAAGGGGTGGTCACAGGCGTTCATCAAGCGATTCTTTTGCATATATCGACACTATTAATGCATCTAACATCGGTTATGCCGATCATGATGAGTATAAATATAAGAATGTCTTATCTATTCCAGCATGGTCACCTCCAGACTTTGATCGCAACAAAGATGCTCGTCATGCATCCATGTATGCTGAAATGAATCTAGCAAAACAAAAGAACAGATCATGGGACTCTTTTTCAAATGTGAGTGGTGTTCCATCTGGCAGAGACAGTGTTGCTTTTCAGAGATCAGGATCACCGAGCCCAAGTACACTATATGAAGCAGATCGGATCCTTCCGACTGCAAATGAAAATCATGATTCAGTAGAATCTAGCTTACAAGACATAAAATCATCTTTTGAAAGAAAGGACGGTTTACATGCAAAGTCACCTGCTTCTGAAACAGATTCAAAGCGTGCTAAACAACAATTTGCTCAACGTTCACGGGTTCGTAAACTTCAGTACATAGCTGAGCTGGAAAGAAATGCAGAAGGAACTGAAGTATCAGCTGAGCTTGAGTTTCTTAACCAGCAGAATCTTATCCTGAGTATGGAGAATAAAGCACTCAAACAACGTTTAGAAAGTTTAGCACAAGAGCAGCTTATCAAATATTTGGAGCAGGAAGTACTGGAGAGAGAGATCGGAAGATTACGTAGCATGTATCAACAACATCTGCAGCAGTCACAACAGCCTCAACAACAACCATCTGGTAGTCATAGACGCTCGAACAGCAGAGACCTTGACTCTCAGTTTGCTAACCTTTCTCTGAAGCACAAGGACACCAATTCTGGGCACGACCCTGCAAATGGAGCACTAAGAATTTAG 1128 0.4202 MANSKSSSGIRNLVYTGPGKHAHALLPPKSPFPTISQAYADYVSNPTIGSKPVNKPREGNSHHQRTSSESHLIEEQPSWLDDLLNEPDTPVRRGGHRRSSSDSFAYIDTINASNIGYADHDEYKYKNVLSIPAWSPPDFDRNKDARHASMYAEMNLAKQKNRSWDSFSNVSGVPSGRDSVAFQRSGSPSPSTLYEADRILPTANENHDSVESSLQDIKSSFERKDGLHAKSPASETDSKRAKQQFAQRSRVRKLQYIAELERNAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKYLEQEVLEREIGRLRSMYQQHLQQSQQPQQQPSGSHRRSNSRDLDSQFANLSLKHKDTNSGHDPANGALRI 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04827 375 Coils Coil 273 300 - -
Trre7g04827 375 MobiDBLite consensus disorder prediction 43 100 - -
Trre7g04827 375 MobiDBLite consensus disorder prediction 224 244 - -
Trre7g04827 375 MobiDBLite consensus disorder prediction 1 29 - -
Trre7g04827 375 MobiDBLite consensus disorder prediction 322 341 - -
Trre7g04827 375 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 22 357 IPR044797 -
Trre7g04827 375 MobiDBLite consensus disorder prediction 56 70 - -
Trre7g04827 375 MobiDBLite consensus disorder prediction 224 246 - -
Trre7g04827 375 CDD bZIP_plant_RF2 239 280 IPR044759 GO:0003700|GO:0006355
Trre7g04827 375 MobiDBLite consensus disorder prediction 322 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04827 Trre-Chr7 55684789 55687679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04827 24 304 bZIP Transcription Factor Family AT2G42380 29.126 1.00e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04827 - - cam:101495568 645.966