Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04818 ATGAAGAAATATGATTCAAAGGTTTTCAAGACATCATTGTTTGGAGAAAATATTGCTGTTTTTTGTGGACCAGCAGGGAACAAGTTTTTGTTTAGTAATGAGAACAAGAATGTTCAAGTATGGTGGCCTAGCACAGTGAAGAATTTGTTAAGGTTGTCTATTGTTAATAAGGTTGGTGATGAAGCAAAGATAACTAGAAAGTTGCTTATGAGCTTTCTTAATCCAGAAACACTCAGAAATTATTTGCCAAAAATGGATAGGGTTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGATCAAGTTGTTGTCTATCCCATAATACAGCTATACACATTTGAATTAGCTTGTTCCTTATTTTTAAGCATGGAAGATCCTAACCATGTAACAAAATTTTCATCACATTTTGAAGAATTTCTAAAAGGGATCATTGGTTTCTCCATTAACATTCCTGGAACAAGGTTTCATAAAGCAATGAAAGCTGCAGATGAAATAAGAAAAGAAATTAGAATAATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAAAAGACATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGACACAAATGGAAGGTTTTTGAGTGAAGCCGAGATTATCGACGACATACTATTACTTCTTTTTGCTGGCCATGACACTTCTAGATCGGTGTTATCTTCTGTCATGAAGTATCTTGGAAATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGTAGGGGAGTTATTGCAATGGGAGGATGTTCAAAAAATGAAATACTCATGGAATGTTGCATCTGAAGTTATGAGGCTGTCGCCGCCCGTCGGTGGCGCTTTCCGAAATGCTATAAAGGATGTCACCTATGCTGATTATAGCATCCCTAATGGATGGAAGTTACATTGGAATGTTCATACAACACAAATGGATCCAACATTGTTTCCAAATCCTGAAAAATTTGATGCTTCAAGATTTGAAGGAGAAGGGCCAATACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGTTAGAGATACTTGTGTTTATGCATAATATTGTGAAATGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAGCCTGAAAATGGACTTCCAATTCAACTTCAACCTTCTCATTGCACATCATAG 1245 0.3631 MKKYDSKVFKTSLFGENIAVFCGPAGNKFLFSNENKNVQVWWPSTVKNLLRLSIVNKVGDEAKITRKLLMSFLNPETLRNYLPKMDRVAQHHINTHWKGKDQVVVYPIIQLYTFELACSLFLSMEDPNHVTKFSSHFEEFLKGIIGFSINIPGTRFHKAMKAADEIRKEIRIIMKKRKVDLEEKKTSPTQDLLSHLLVTPDTNGRFLSEAEIIDDILLLLFAGHDTSRSVLSSVMKYLGNLPEVYEQVLKEQLEISQGKEVGELLQWEDVQKMKYSWNVASEVMRLSPPVGGAFRNAIKDVTYADYSIPNGWKLHWNVHTTQMDPTLFPNPEKFDASRFEGEGPIPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKCFKWDLVNPDEKFKYDPMLEPENGLPIQLQPSHCTS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04818 414 PRINTS P450 superfamily signature 278 289 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS P450 superfamily signature 222 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS P450 superfamily signature 350 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 352 361 IPR017972 GO:0005506|GO:0016705
Trre7g04818 414 PRINTS E-class P450 group I signature 317 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS E-class P450 group I signature 359 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS E-class P450 group I signature 349 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PRINTS E-class P450 group I signature 211 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 PANTHER CYTOCHROME P450 26 7 395 - -
Trre7g04818 414 Gene3D Cytochrome P450 1 410 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 SUPERFAMILY Cytochrome P450 2 409 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04818 414 CDD CYP90-like 1 409 - -
Trre7g04818 414 FunFam Taxadiene 5-alpha hydroxylase 1 410 - -
Trre7g04818 414 Pfam Cytochrome P450 2 389 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04818 Trre-Chr7 55516188 55518702 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04818 8 314 Cytochrome P450 AT5G36110 44.625 1.25e-88 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04818 - - gmx:100778750 671.774