Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04817 ATGGAGGGGTACAAGCTGATATTTTTACCACTCTTTGTTCTATTTTTACATTTCATCACAAGAATTATCAAACTTAGAAAACTGAATCTTCCTAAGGGAACCTTAGGATGGCCTATTATTGGAGAAACATATCAGTTTTTTTTCAAAGCAAACATTGAGGGAAAGAGAATAAGATTCATACAAGAGAAAATGAAGAAATATGATTCAAAGGTTTTCAAGACATCATTGTTTGGAGAAAATATTGCTGTTTTTTGTGGACCAGCAGGGAACAAGTTTTTGTTTAGTAATGAGAACAAGAATGTTCAAGTATGGTGGCCTAGCACAGTGAAGAATTTGTTAAGGTTGTCTATTGTTAATAAGGTTGGTGATGAAGCAAAGATAACTAGAAAGTTGCTTATGAGCTTTCTTAATCCAGAAACACTCAGAAATTATTTGCCAAAAATGGATAGGGTTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGATCAAGTTGTTGTCTATCCCATAATACAGCTATACACATTTGAATTAGCTTGTTCCTTATTTTTAAGCATGGAAGATCCTAACCATGTAACAAAATTTTCATCACATTTTGAAGAATTTCTAAAAGGGATCATTGGTTTCTCCATTAACATTCCTGGAACAAGGTTTCATAAAGCAATGAAAGCTGCAGATGAAATAAGAAAAGAAATTAGAATAATTATGAAGAAAAGGAAAGTGGATTTGGAAGAAAAAAAGACATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGACACAAATGGAAGGTTTTTGAGTGAAGCCGAGATTATCGACGACATACTATTACTTCTTTTTGCTGGCCATGACACTTCTAGATCGGTGTTATCTTCTGTCATGAAGTATCTTGGAAATTTGCCTGAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGTAGGGGAGTTATTGCAATGGGAGGATGTTCAAAAAATGAAATACTCATGGAATGTTGCATCTGAAGTTATGAGGCTGTCGCCGCCCGTCGGTGGCGCTTTCCGAAATGCTATAAAGGATGTCACCTATGCTGATTATAGCATCCCTAATGGATGGAAGTTACATTGGAATGTTCATACAACACAAATGGATCCAACATTGTTTCCAAATCCTGAAAAATTTGATGCTTCAAGATTTGAAGGAGAAGGGCCAATACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGACAAGAGTTTGCTCGGTTAGAGATACTTGTGTTTATGCATAATATTGTGAAATGTTTCAAGTGGGATTTAGTTAATCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAGCCTGAAAATGGACTTCCAATTCAACTTCAACCTTCTCATTGCACATCATAG 1434 0.3577 MEGYKLIFLPLFVLFLHFITRIIKLRKLNLPKGTLGWPIIGETYQFFFKANIEGKRIRFIQEKMKKYDSKVFKTSLFGENIAVFCGPAGNKFLFSNENKNVQVWWPSTVKNLLRLSIVNKVGDEAKITRKLLMSFLNPETLRNYLPKMDRVAQHHINTHWKGKDQVVVYPIIQLYTFELACSLFLSMEDPNHVTKFSSHFEEFLKGIIGFSINIPGTRFHKAMKAADEIRKEIRIIMKKRKVDLEEKKTSPTQDLLSHLLVTPDTNGRFLSEAEIIDDILLLLFAGHDTSRSVLSSVMKYLGNLPEVYEQVLKEQLEISQGKEVGELLQWEDVQKMKYSWNVASEVMRLSPPVGGAFRNAIKDVTYADYSIPNGWKLHWNVHTTQMDPTLFPNPEKFDASRFEGEGPIPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKCFKWDLVNPDEKFKYDPMLEPENGLPIQLQPSHCTS 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04817 477 Gene3D Cytochrome P450 19 473 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 SUPERFAMILY Cytochrome P450 24 472 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS P450 superfamily signature 413 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS P450 superfamily signature 422 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 Pfam Cytochrome P450 31 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PANTHER CYTOCHROME P450 26 27 458 - -
Trre7g04817 477 CDD CYP90-like 64 472 - -
Trre7g04817 477 FunFam Taxadiene 5-alpha hydroxylase 22 473 - -
Trre7g04817 477 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506|GO:0016705
Trre7g04817 477 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre7g04817 477 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04817 Trre-Chr7 55516188 55518891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04817 29 377 Cytochrome P450 AT5G36110 43.182 3.08e-96 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04817 - - gmx:100778750 726.472