Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04783 ATGCGGGATGTTGGTTTTTTGACAGATGGCAGTAACATCTACAAGTTTGAGAATGTCCAAGGCGAATTTCATGAAATTCATAAGGATTTTAATACTCAAAGCCATCCCTCTTTAAATATAGATCCTTTCAAATTTGACGTTCCATCCCCAGATGATGTGGTTTTTACTGGCCTACATTCTTCAAAAAAGGGTTTGAAAGACAAAGTTAAAAACTCTAAAGATTCCCAGCTTTCATCAAGCAGCAGAGAGAAGAAAGAACTTGCTGTAGAATCCAATGCTGAAAGTTTAGATAACCTATCATCCTTAATGCAAAGGAACAAGCAGGACAGTGCAGCCAAGAACAAGCTTTCCAAAAATGTAGAAATTAATCTCGAAACAATTGGTGAAACCTTAAACAGCTTATCATCATCTTTGCCAAAGAACAAAGGAGATAATGCAAATAGAATAAATTCTTCAAAAAATGGTACAAATGGTACCCGATCAGACAAAGAAAAGTCTGGTAGTTTGTCTGCACTCCCGAAAGTCGAAGAAAGTGATAAGCTTAGTTTGTCTTCTAACAAAGACGGAAAGTCTGAAAGTGCTTCCAGCAGTTCTACCCACATGGTTCTTGATGAAAGATCTGGAAATTCTGATAATACTAATGCTAAGGGACCTCATAAACAAGTTACTTACCAGCCAGAAAAGTGGATGCTCCCTCAACAGTCTGAAGATACGCTGACTCAGTTGAATCTTGCAATTGTTGGTCATGTTGATTCTGGAAAATCAACACTATCCGGTAGGTTATTACACCTATTGGGACGGATTTCCAAGAAAGATATGCACAAAAATGAAAAGGAGGCCAAGTTACAGGGCAAAGGATCCTTTGCTTATGCTTGGGCACTTGATGAAAGTTCTGAAGAAAGGGAAAGGGGAATAACCATGACAGTAGCTGTGGCATATTTTGACACTAAGAAATATCACGTTGTTGTGCTTGACTCTCCTGGTCATAAAGATTTTATCCCAAACATGATTTCTGGAGCGACACAAGCCGATGCTGCAATTCTTGTTATAGATGCCTCACTTGGTGCATTTGAAGCTGGTATGGATGGTGGCAAAGGACAAACAAGGGAGCATGCACAACTTATAAGGAGTTTTGGTGTAGACCATGTTATAGTTGCAGTAAATAAGATGGATGCTGTAGCATTCTCAAAAGACCGTTTTGATTTTATAAGACATCAGCTGGGAACTTTTCTCCGCTCATGTGGTTTCAAAGATTCTTCTCTCTCATGGATTCCCTTGAGTGCCATGGAAAATCAAAATTTGGTGGCATCCCCTTCTGACGCTCATTTCAAAAACTGGTATACTGGACCTTATCTGTTAGATGCAATCGACTCACTACAACCTCCTACTAGAGAATTCGCAAAACCTCTGTTAATGCCGATATGTGATATCATCAAATCAACTGCGCAAGGACAGGTGTCTGCTTGTGGTAAACTGGAAGCAGGAGCTATTCGAAATGGAACAAAGGTATTAGTTATGCCTTCAGATGTTGTTGGAACAGTACGCACATTGGAGCGTGACTCTAATGCCTGCTCTGTTGCAAGAGCTGGAGATAACGTTGCTGTAACGTTGCAAGGTGTTGATGGAAGTCATGTATTTTCTGGAGGTGTATTATGTCATCCTGACTTTCCTGTTGCAATTGCAAAGCATTTGGAGTTGAAATTGCTTGTCTTAGATGGTGCAAGTCCCATATTGGTCGGCGCTCAGTTAGAGTTTCATATACATCATGCAAAGGAACCTGCTAGAGTTTCAAAAATATTGTCAGTACTTGATCCCAAAACCGGTAAGGTGACCAAAAAGTCTCCACGCTGTCTCACGTCAAAACAAAGTGCAGTAATTGAGGTGATTTTGCATGAGCCAGTCTGCGTGGTAGAGTTTTCTAGATGTAAAGCTCTTGGAAGAGTATCCCTTAGATCATTAGGAAGAACAATTGCAGTTGGACTTGTGACAAGAATAATCGAAGAACAAGGTTAA 2013 0.4009 MRDVGFLTDGSNIYKFENVQGEFHEIHKDFNTQSHPSLNIDPFKFDVPSPDDVVFTGLHSSKKGLKDKVKNSKDSQLSSSSREKKELAVESNAESLDNLSSLMQRNKQDSAAKNKLSKNVEINLETIGETLNSLSSSLPKNKGDNANRINSSKNGTNGTRSDKEKSGSLSALPKVEESDKLSLSSNKDGKSESASSSSTHMVLDERSGNSDNTNAKGPHKQVTYQPEKWMLPQQSEDTLTQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKLQGKGSFAYAWALDESSEERERGITMTVAVAYFDTKKYHVVVLDSPGHKDFIPNMISGATQADAAILVIDASLGAFEAGMDGGKGQTREHAQLIRSFGVDHVIVAVNKMDAVAFSKDRFDFIRHQLGTFLRSCGFKDSSLSWIPLSAMENQNLVASPSDAHFKNWYTGPYLLDAIDSLQPPTREFAKPLLMPICDIIKSTAQGQVSACGKLEAGAIRNGTKVLVMPSDVVGTVRTLERDSNACSVARAGDNVAVTLQGVDGSHVFSGGVLCHPDFPVAIAKHLELKLLVLDGASPILVGAQLEFHIHHAKEPARVSKILSVLDPKTGKVTKKSPRCLTSKQSAVIEVILHEPVCVVEFSRCKALGRVSLRSLGRTIAVGLVTRIIEEQG 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04783 670 Gene3D Translation factors 560 669 - -
Trre7g04783 670 MobiDBLite consensus disorder prediction 133 166 - -
Trre7g04783 670 FunFam elongation factor 1-alpha isoform X4 560 669 - -
Trre7g04783 670 MobiDBLite consensus disorder prediction 64 92 - -
Trre7g04783 670 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 241 484 IPR027417 -
Trre7g04783 670 SUPERFAMILY Translation proteins 461 556 IPR009000 -
Trre7g04783 670 PRINTS GTP-binding elongation factor signature 338 349 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 PRINTS GTP-binding elongation factor signature 322 332 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 PRINTS GTP-binding elongation factor signature 383 392 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 PRINTS GTP-binding elongation factor signature 302 310 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 PRINTS GTP-binding elongation factor signature 243 256 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 FunFam Elongation factor 1 alpha-like protein 231 463 - -
Trre7g04783 670 MobiDBLite consensus disorder prediction 187 220 - -
Trre7g04783 670 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 562 666 IPR009001 -
Trre7g04783 670 CDD EF1_alpha 243 462 - -
Trre7g04783 670 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 239 470 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 Pfam Elongation factor Tu GTP binding domain 242 458 IPR000795 GO:0003924|GO:0005525
Trre7g04783 670 MobiDBLite consensus disorder prediction 64 91 - -
Trre7g04783 670 CDD HBS1_C_III 557 665 - -
Trre7g04783 670 MobiDBLite consensus disorder prediction 133 221 - -
Trre7g04783 670 Gene3D - 230 463 IPR027417 -
Trre7g04783 670 Pfam Elongation factor Tu C-terminal domain 565 665 IPR004160 -
Trre7g04783 670 FunFam Translation elongation factor EF-1 466 556 - -
Trre7g04783 670 PANTHER TRANSLATION FACTOR 237 665 - -
Trre7g04783 670 Gene3D Translation factors 467 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04783 Trre-Chr7 55286006 55291295 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04783 39 668 Eukaryotic Initiation Factors Gene Family AT5G10630 59.810 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04783 K14416 - gmx:100801724 1073.54