Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04778 ATGCAAGGGAACAATATCTGTCCTCCTTTAACACCAAGGTCGAGATTGGAAAGGCTTTTGCGAGAAAGAGAGCTACGGAAATCAAGTCGGTATACTCAATCGACTGAGGATGGAAGAGATGGCAACAAAGAGGGAGAACAAGTTTATAGTGATTCGTTCTTCGTAAGTGAGAACGATAATGAGGAAGAGGTTGCGGAAACGGTGTTTGCGGATGATAGGCCTCGAAAACAACGTTTGTTGGTGGTAGCTAATAGGTTGCCTGTCTCTGCTGTTAGGGAGGGTGTGGATTCATATCACCTTGAGATCAGTGTTGGTGGTCTTGTCAGTGCACTTTTAGGTGTAAAGGAGTTTGACACCAGATGGATTGGGTGGGCTGGTGTGAATGTTCCTGATGAAGTTGGGCAAAAAGCTTTGACTAAAGCTTTAGCTGAAATGCGATGTATCCCGGTATTTCTTGACGAGGAGATAGTTAACGAGTACTATAATGGTTATTGCAACAATATCTTGTGGCCACTATTTCATTACCTTGGACTTCCACAAGAGGACAGGCTAGCTACCACGCGAAGTTTCCAAACTCAATTTGACGCGTATAAGAAGGCGAACCAAATGTTTGCCGATGTAGTGAATCAGCATTATCAGGATGGAGATGTTGTTTGGTGCCATGATTATCACCTAATGTTTCTTCCGAGATGTTTGAAAGAATACAATGACAAAATGAAAGTTGGATGGTTTCTCCATACGCCTTTTCCTTCCTCGGAAATACATAGGACTCTGCCGTCCAGATCAGAGCTGTTGAGATCAGTACTTGCCGCGGATTTGGTTGGATTCCATACTTATGATTATGCGAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGGATAGAAGGTACACCTGAAGGAGTAGAAGATCAAGGGAGGCTTACCCGTGTGGCTGCGTTTCCTATTGGAATTGACTCTGAAAGATTTATTCGAGCCCTTGCGCTTCCTGAAGTCCAGTCTCACATGAAAGAATTGAAAGAAAGATTTGCAGGCCGAAAGGTAATGTTGGGCGTTGATCGTCTTGATATGATAAAAGGAATTCCCCAGAAAATCTTGGCATTTGAGAAGTTTCTTGAGGAGAATTCTCATTGGCATGATAAAGTTGTCCTGTTGCAAATTGCTGTACCTTCGAGGACAGATTGTCCTGAATATCAAAAGCTTACGAGCCAGGTACATGAAATTGTAGGACGCATCAATGGAAGATTCGGAACACTTACCGCAGTCCCAATACACCATCTGGATCGGTCACTTGACTTTCATGCATTATGTGCACTCTATGCTGTTACTGATGTAGCACTTGTTACATCACTAAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTCGCATGTCAAGCTTCGAAGAAGGGGGTTCTCATCTTAAGTGAGTTTGCAGGTGCAGCACAGTCTCTTGGTGCTGGTGCAATCTTAGTAAATCCATGGAACATCACAGAGGTTGCTGCTTCTATTGGTTATGCTTTGAATATGCCAGCCGATGAAAGAGAAAAACGGCATCAGTTTAATTTCAAGCATGTCACAACTCACACGTCACAAGAATGGGCTGCAACTTTTGTGAGTGAACTGAATGATACCATTGTTGAAGCTCAGCTTAGAACAAGACAAATTCCTCCATTACTTCCTAATAAAGTGGCAGTTGATTGTTACTCAAAATCCAATAACAGATTAATTATACTGGGTTTCAATGCCACTCTGACTGAACCGGTGGATGCTCTTGGAAGGGGTGATCAGATTAAAGAATTGGAACTAAAAGTGCATCCAGATCTGAAGGAACCTTTAAAGAAGTTATCCGAAGATCCAAAGACAACAATAGTTGTTCTGAGTGGGAGTGGTAGAGCTGTCTTGGACAAAAACTTTGGCGAATACAATATGTGGTTGGCAGCGGAAAATGGAATGTTTTTGCGACTTACTTCAAGTGAATGGATGACAACTATGCCTGAAAATTTAAATATGGATTGGGTTGATAGTGTAAAGCATGTTTTTGAGTATTTTACTGAAAGAACCCCACGGTCTCATTTTGAGCTACGCGAAACTTCAATTATATGGAACTATAAATATGCAGATGTTGAGTTTGGAAGACTTCAAGCAAGAGATCTGCTTCAGCATCTTTGGACAGGGCCAATATCAAATGCATCTCTTGATGTTTTCCAAGGTGGTCGATCTGTTGAGGTCCGTGCAGTTGGTGTGTCAAAGGGAGCAGCTATCGACCGTATCCTGGGAGAGATAGTTCATAACAAAGGCATGAAGGAACCAATCGATTACGTCCTATGCATTGGTCACTTTCTGGCAAAGGATGAAGATGTCTATAAATTTTTTGAGCCAGAGCTTCCTACGGAATCATCTCCAATGGCGAAAGCTATGCTATCCAATTCTTATAGGCCATCATCTCTGCCAAGATTTTCATCCAGCAAAAGTGGCTCGAAAGCATCTCACTATAAGAAGCAACGTTCGCTGTCAAATATAGAAAGGAGAGCCATTGAGCGCACAACTAGTGAGCCTTGGAGACCACCAGGCCGTGATAGAATGTCGGTATATGAGGGTTCCTCAGTTCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTTCCCGAAAGAGATCAAGTGCCCGCTACCTTCTTAAAACGTCACATGATATTGTCAATCTCTTAAGTGACCTGGCAGATCGTTCTTCATCGCCACCAACTTGA 2751 0.4246 MQGNNICPPLTPRSRLERLLRERELRKSSRYTQSTEDGRDGNKEGEQVYSDSFFVSENDNEEEVAETVFADDRPRKQRLLVVANRLPVSAVREGVDSYHLEISVGGLVSALLGVKEFDTRWIGWAGVNVPDEVGQKALTKALAEMRCIPVFLDEEIVNEYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQTQFDAYKKANQMFADVVNQHYQDGDVVWCHDYHLMFLPRCLKEYNDKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGIEGTPEGVEDQGRLTRVAAFPIGIDSERFIRALALPEVQSHMKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENSHWHDKVVLLQIAVPSRTDCPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQASKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIGYALNMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRTRQIPPLLPNKVAVDCYSKSNNRLIILGFNATLTEPVDALGRGDQIKELELKVHPDLKEPLKKLSEDPKTTIVVLSGSGRAVLDKNFGEYNMWLAAENGMFLRLTSSEWMTTMPENLNMDWVDSVKHVFEYFTERTPRSHFELRETSIIWNYKYADVEFGRLQARDLLQHLWTGPISNASLDVFQGGRSVEVRAVGVSKGAAIDRILGEIVHNKGMKEPIDYVLCIGHFLAKDEDVYKFFEPELPTESSPMAKAMLSNSYRPSSLPRFSSSKSGSKASHYKKQRSLSNIERRAIERTTSEPWRPPGRDRMSVYEGSSVLDLKGDNYFSCAVSRKRSSARYLLKTSHDIVNLLSDLADRSSSPPT 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04778 916 Pfam Trehalose-phosphatase 601 803 IPR003337 GO:0003824|GO:0005992
Trre7g04778 916 MobiDBLite consensus disorder prediction 835 855 - -
Trre7g04778 916 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 667 747 - -
Trre7g04778 916 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 78 543 IPR012766 GO:0003825|GO:0005992
Trre7g04778 916 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 77 546 - -
Trre7g04778 916 MobiDBLite consensus disorder prediction 23 45 - -
Trre7g04778 916 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 325 527 - -
Trre7g04778 916 CDD HAD_TPP 576 795 - -
Trre7g04778 916 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 70 324 - -
Trre7g04778 916 SUPERFAMILY HAD-like 575 763 IPR036412 -
Trre7g04778 916 MobiDBLite consensus disorder prediction 812 861 - -
Trre7g04778 916 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 71 908 IPR001830 GO:0003824|GO:0005992
Trre7g04778 916 Gene3D Glycogen Phosphorylase B; 325 527 - -
Trre7g04778 916 Pfam Glycosyltransferase family 20 78 543 IPR001830 GO:0003824|GO:0005992
Trre7g04778 916 MobiDBLite consensus disorder prediction 812 834 - -
Trre7g04778 916 FunFam Alpha,alpha-trehalose-phosphate synthase 601 671 - -
Trre7g04778 916 Gene3D - 603 761 IPR023214 -
Trre7g04778 916 Gene3D Glycogen Phosphorylase B; 70 324 - -
Trre7g04778 916 CDD GT20_TPS 78 543 IPR001830 GO:0003824|GO:0005992
Trre7g04778 916 Gene3D - 667 747 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04778 Trre-Chr7 55264276 55269459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04778 1 914 Trehalose Biosynthesis Gene Families AT1G78580 73.452 0.0 1395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04778 K16055 - gmx:100816642 1543.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04778 7 55264276 55269459 Trre7g04778 7 55264276 55269459 ECH