Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04762 ATGATGCTATCTAAGATCTTCTTTGTTTTCTCAATCATTGCATTCATCTGTTTCAATTCCTTGGATTATGTTCAATCTAAACTTCCCCAGCAAGAGATTGATGCTCTTGAAGAAATCACAAGCACAATGGGTGCAACCTATTGGAAATTTGATGGTGATTCATGTCAAATTAAAATGTTTGGTTTAACTCAAAATTCACCTGATGGATCTGAAAGAAATATTGAGTGTGATTGCTCTTCTGTAAATGACACCTTTTGTCACGTAGTAAGGATTACATTCAAGGGGTACAATCTTCCCGGCACACTTCCACCTCAATTGGTTAAGCTTCCGTATCTCAAAGAAATTGATTTTGCTTTGAACTACCTAAATGGTACGATTCCGAAGGAATGGGCTTCAATTGAACTAACTTCAATCTCGCTACTTGTTAATCGTTTATCAGGGGAGATTCCTAAGGAGTTGGGAAATATTACCACTCTAACATACCTGAACCTTGAAGCAAACCAATTTGTCGGTCTTGTTCCTTCTGAACTTGGAAGTTTATCTAACCTGCAGAGTTTGATTCTATCGTCCAATAAATTGTCTGGGAACTTACCAGCGGCATTTGCTAAGTTACATAACTTGACAGATTTTAGGATAAATGATAATAATTTCAATGGAAAAATACCTAGCTTCATACCAAATTGGCAACAGCTTCAAAGATTAGAAATGCATGCAAGTGGACTTGAGGGACCTATCCCGTCAACGATATCTCTTTTGACTAATTTATCTCAATTGAGGATTAGTGACATAAATGGTCCAAGTCAGGATTTTCCGATTCTAAGCAACATGTCTGGAATGATAAGATTGATTTTGAGGAGTTGCAATATTACTGGAAAGATTCCTAGCTATTTCTGGACAATGAAGAGTTTGGAAATGTTGGATCTAAGTTTCAATAATTTGTTTGGGGAAATACCGGCAATGGTACATGTGGGACATCTGAGATTTGTATTCCTAACTGGGAACAAGCTAAGTGGTAATGTACCTGACTCAATCTTGATGGATGGAAGCAATGTCGATCTTTCTTACAACAACTTTACATGGCAAGGACCTGGGAAACCTACATGTGGAAAATATCTGAATTTAAACCTAAACTTGTTCCGGAGCTCGTTAGGGACCAATGCATTACAAGGAGTTCTTCCATGTTCAGAAACTTTCACCTGTCCTAGATATTCAAGTTGTTTGCATGTTAATTGTGGTGGAAACAATATACAGGTGAGGGAAAATGGTAAAAATATCCTCTATATTGGAGATGGAGATGTGACGGGGGGTGCTGCTAAATATTATATTGATGACGAAAATCATTGGGGTTTTAGTAGCACGGGGGACTTCATGGATGACGGTGATTTCCAAAATACACGTTACTCCAGGTCTTTGTTATCATCAAGTATGCCATTGCCAGAAATATATACAACAGCTCGTGCTGCTCCCATTTCGCTTACTTATTTTCAGTATTGCTTGGAAAATGGGAAATATACCGTTCATCTCCACTTTGCAGAAATACAATTTACAAATGATAAGACATATAAAAGTCTTGGGAAGCGCTTATTTGATATCTATGTTCAGGGAATATTAGTTTGGAAGGATTTTAATATTGAAGATGAATCACACCTTGCTCAAAAACCGCGTATATTATCAGCAAATAATGTCACTGTAACAGATGGTATTCTAGAGATTCGATTCTACTGGGCTGGCAAGGGGACTACAAGGATTCCTGTTTCTGGAGTATATGGTCCCCTTATATCAGCTTTCTCTATTGTTTCGGATTCTAAACCTTGTTCAGACCAAAAGAATGGAAGCCGTAATTTAGTCATTGGACTAGGATTTGGAGTTACAGCAGTGTGCCTAGTCCTTATTGCGGTAGGCATTTTTTGGAGGAAAGGCTACTTCAAAGGAATAAGTAGAAGAGAAAAAGTTTTCAAAGGGCAAGATTTTCAGATGAGGACATTTACCTTAAAACAAATTAGAGCGGCCACAGATGGATTCAGTCCTGCTAATAAGGTTGGGGAAGGTGGTTTTGGTCCTGTCTACAAGGGCCAATTATCTGATGGTACATGGGTAGCAGTCAAACAGCTCTCCTCGAAGTCGCGCCAGGGAAACCGGGATCAATTAATATTGGTTTATGAGTACATGGAAAATAATAGCCTGGCCCGTGCTTTATTCAGTTCAGAAAATCAGCTTAAACTTGATTGGCCATCAAGGCTTAGGATCTGCATTGGCATAGCAAAAGGTCTAGCATTTCTTCACGAAGAATCAAGACTCAAGGTTGTTCATCGAGATATCAAAGCTACTAATGTGTTACTGGATGGGAATTTAAACCCTAAAATATCTGATTTTGGGTTGGCTAGGCTTGATGAAGAGGAGAAGACCCATATAATCACCCGAGTTGCAGGCACAATAGGATATATGGCACCGGAATATGCTTTATGGGGTTACTTGAGTTACAAGGCTGATGTTTACAGTTTTGGAGTTGTGGTCTTGGAAACTGTTAGTGGAAAGAGTAATAACAATTACATGCCAAGTGATAATTGTGTTTGCCTTCTAGATAAGGCATTATTTCTGGAACGGACTAAAAATGTCATGTCACTGGTTGATGAGAGGTTGGGATCAGAGATAAACACAACTGAAACAAAAAATTTAGTGAAAGTGGCTCTCTTGTGTATAAATCCATCGCCATCACTTAGGCCTGCAATGTCTGAGGTTGTAAACATGCTTGAGGGAAGAATAAGCATTCCAGATGTTATCCCCGAGGGTAATACTCTCAGTGAAGATCTAAGGTTTAAATCCATGAGGGACATCCATCAAAACAAGGAAGGTCATAGTGCAAGCACAAGCCGTACAGACGGTTCAACAGGATTGCTTACACATAGCACACCCTCAATACTTGGCAATGATACCCATGAGATATCCTCCGAACCGTAA 2958 0.3905 MMLSKIFFVFSIIAFICFNSLDYVQSKLPQQEIDALEEITSTMGATYWKFDGDSCQIKMFGLTQNSPDGSERNIECDCSSVNDTFCHVVRITFKGYNLPGTLPPQLVKLPYLKEIDFALNYLNGTIPKEWASIELTSISLLVNRLSGEIPKELGNITTLTYLNLEANQFVGLVPSELGSLSNLQSLILSSNKLSGNLPAAFAKLHNLTDFRINDNNFNGKIPSFIPNWQQLQRLEMHASGLEGPIPSTISLLTNLSQLRISDINGPSQDFPILSNMSGMIRLILRSCNITGKIPSYFWTMKSLEMLDLSFNNLFGEIPAMVHVGHLRFVFLTGNKLSGNVPDSILMDGSNVDLSYNNFTWQGPGKPTCGKYLNLNLNLFRSSLGTNALQGVLPCSETFTCPRYSSCLHVNCGGNNIQVRENGKNILYIGDGDVTGGAAKYYIDDENHWGFSSTGDFMDDGDFQNTRYSRSLLSSSMPLPEIYTTARAAPISLTYFQYCLENGKYTVHLHFAEIQFTNDKTYKSLGKRLFDIYVQGILVWKDFNIEDESHLAQKPRILSANNVTVTDGILEIRFYWAGKGTTRIPVSGVYGPLISAFSIVSDSKPCSDQKNGSRNLVIGLGFGVTAVCLVLIAVGIFWRKGYFKGISRREKVFKGQDFQMRTFTLKQIRAATDGFSPANKVGEGGFGPVYKGQLSDGTWVAVKQLSSKSRQGNRDQLILVYEYMENNSLARALFSSENQLKLDWPSRLRICIGIAKGLAFLHEESRLKVVHRDIKATNVLLDGNLNPKISDFGLARLDEEEKTHIITRVAGTIGYMAPEYALWGYLSYKADVYSFGVVVLETVSGKSNNNYMPSDNCVCLLDKALFLERTKNVMSLVDERLGSEINTTETKNLVKVALLCINPSPSLRPAMSEVVNMLEGRISIPDVIPEGNTLSEDLRFKSMRDIHQNKEGHSASTSRTDGSTGLLTHSTPSILGNDTHEISSEP 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04762 985 Gene3D Ribonuclease Inhibitor 196 267 IPR032675 -
Trre7g04762 985 Gene3D Ribonuclease Inhibitor 62 195 IPR032675 -
Trre7g04762 985 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 34 197 - -
Trre7g04762 985 Pfam Malectin domain 406 596 IPR021720 -
Trre7g04762 985 ProSitePatterns Serine/Threonine protein kinases active-site signature. 768 780 IPR008271 GO:0004672|GO:0006468
Trre7g04762 985 Gene3D Transferase(Phosphotransferase) domain 1 726 924 - -
Trre7g04762 985 Gene3D Ribonuclease Inhibitor 268 377 IPR032675 -
Trre7g04762 985 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 404 601 - -
Trre7g04762 985 MobiDBLite consensus disorder prediction 947 985 - -
Trre7g04762 985 ProSiteProfiles Protein kinase domain profile. 674 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04762 985 SUPERFAMILY Protein kinase-like (PK-like) 656 926 IPR011009 -
Trre7g04762 985 Gene3D Phosphorylase Kinase; domain 1 646 725 - -
Trre7g04762 985 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 266 387 - -
Trre7g04762 985 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 714 - -
Trre7g04762 985 SUPERFAMILY L domain-like 70 343 - -
Trre7g04762 985 MobiDBLite consensus disorder prediction 954 985 - -
Trre7g04762 985 SMART serkin_6 674 917 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04762 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 198 264 - -
Trre7g04762 985 FunFam Putative LRR receptor-like serine/threonine-protein kinase 723 929 - -
Trre7g04762 985 Gene3D - 404 603 - -
Trre7g04762 985 Pfam Protein tyrosine and serine/threonine kinase 713 917 IPR001245 GO:0004672|GO:0006468
Trre7g04762 985 Pfam Leucine rich repeat 158 217 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04762 Trre-Chr7 55172309 55178257 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04762 8 812 Receptor kinase-like Gene Family AT1G29750 58.034 0.0 969
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre7g04762 PK_Tyr_Ser-Thr 3.9e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04762 - - mtr:11406167 1679.84