Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04750 ATGATGAAGTGGGGTGGAAGAAAAACTTCTTCAGCTTCTTCTTCTAAACATTCCTTCATCTCTCATGTATCTCCTTTTTCATGGCTATCAAAGTTCAAGCAAATGAAAATCAACTCTGACATAGAGGTAAAACCTGAAAAGCTGAAGCAGAACATCCCTTCTGAAAATAGTTCATCACAATTTCCTGAAAATAGAGGAAAGTTTTACGGAGGTGGTGATGACGATGCTTTCTGGAGATTATCATTTGGTGAAGAGGTTACTAATGAGCAAAAGAAGAAAAGTGAAGATAATATGAAGCCAGTAATGTACAATTTGGATACTAAAAGACATGGAAGAAGTAGAAGAAGAGAAGATAGAAAATTGCTAAATGAAACAAAGAGTGCAAAGGAACTTGAATACTTGAAGAGACGATACGAGAGAAAAGCACAAAGAGTTCTACAAGAGAAGCTCTTGAAATTAGAGACTGCAGCAGAGGAAGCTGAATTTGCATCAAGTAAATGTAAATTCTTAGAAAAAGATGAGCTTCAATTTGAATCACCAAGTACCTACTTATTTTCTTCTTCTGTAGATGCCGAAAGTTCTGACCTTGGCCTTGGAAGTATAAGAGAAAATGGTTTGAAACAAAGTGAGGAGTTTAAATCAAAGGGTAACAAAAAAAGGGAATCAGTCCATGTGAGCAGAGAAATCCAGAGGAGGAAACCAAAGCACAGTCCCAAGGTAAGAGTGCATTCTCCAAGGATGGCTGCAAAGGTTGAAATATGCAAAATAAAGGCGATACAGGACAAAAAGAAAGCAAAACTAAAGATGAAGAAAGAAGAAGAGGAAACAGAAGAAGGGTTAGATAGCTTTGCTGTTGTGAAGTGTTCTTTGGATCCACTACAAGATTTTAGAGATTCAATGATTGAGATGATCAAAGAGAAACAGATGAGTCAGACAGAAGAAATGGAAGAGCTATTAGCATGTTATTTGAGTTTGAATTCTAATGAATATCATGATCTCATTATCACAGCTTTCCGGCAGGTATGGTTATGTATGAGCCAATCTAGTTTGTGTAATAAATCAGACAAGCAATGTTGTTACTATGATTAA 1089 0.3618 MMKWGGRKTSSASSSKHSFISHVSPFSWLSKFKQMKINSDIEVKPEKLKQNIPSENSSSQFPENRGKFYGGGDDDAFWRLSFGEEVTNEQKKKSEDNMKPVMYNLDTKRHGRSRRREDRKLLNETKSAKELEYLKRRYERKAQRVLQEKLLKLETAAEEAEFASSKCKFLEKDELQFESPSTYLFSSSVDAESSDLGLGSIRENGLKQSEEFKSKGNKKRESVHVSREIQRRKPKHSPKVRVHSPRMAAKVEICKIKAIQDKKKAKLKMKKEEEETEEGLDSFAVVKCSLDPLQDFRDSMIEMIKEKQMSQTEEMEELLACYLSLNSNEYHDLIITAFRQVWLCMSQSSLCNKSDKQCCYYD 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04750 362 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 130 346 IPR038933 GO:0045892
Trre7g04750 362 Pfam Transcriptional repressor, ovate 289 345 IPR006458 -
Trre7g04750 362 Coils Coil 153 173 - -
Trre7g04750 362 MobiDBLite consensus disorder prediction 88 122 - -
Trre7g04750 362 NCBIfam uncharacterized plant-specific domain TIGR01568 284 345 IPR006458 -
Trre7g04750 362 Coils Coil 255 277 - -
Trre7g04750 362 Coils Coil 128 148 - -
Trre7g04750 362 MobiDBLite consensus disorder prediction 207 228 - -
Trre7g04750 362 MobiDBLite consensus disorder prediction 43 72 - -
Trre7g04750 362 ProSiteProfiles OVATE domain profile. 285 344 IPR006458 -
Trre7g04750 362 MobiDBLite consensus disorder prediction 207 242 - -
Trre7g04750 362 MobiDBLite consensus disorder prediction 50 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04750 Trre-Chr7 55074471 55075559 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Trre7g04750 Ovate 2.8e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04750 - - tpra:123914565 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04750 7 55074471 55075559 Trre7g04750 7 55074471 55075559 ECH
Trre7g04750 7 55074471 55075559 Trre3g00668 3 4595623 4596627 PCT