Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04739 ATGCTTCATGCAAGAGAATACATCTCTATTCTCATTCTCTTCATGATATCCACTTTTTTCTTACCAACCTTAATAGCTGACACAGATGTTCAAATACTAATGAATTTCAAAAGCTTCTTGTTTAATGCAGATGCATTAAACAATTGGAGTAACAATTCTATTAATGTTTGCACATGGAATGGTTTAATATGCAAAGATCAAACACTTCATGGTTTGAGACTAGAGAATATGGGACTAAGTGGAACAATTAATGTAGACATACTTATGAATTTGTCCACTTTGAGAAGTTTTAGTGTCATTAATAATAATTTTGAGGGTCCATTTCCTGCATTTAATAAACTTGTGGGATTAAGGGCATTGTTTTTGGCTAATAATAAATTCTCTGGTGAAATTTCTGATGATGCTTTTGAAGGGTTAAGAAGGCTTAGGAGAGTTGTCTTAGCAGAAAATGAATTTAAGGGTCATATTCCTAGTTCTCTTGCTCAATTGCCTAGACTTTATGATGTTGATTTACATGGAAATAGCTTTTATGGTAATATACCAGAATTTCTACAAAGTGATTTCAGAGTGTTTAATTTGTCTAACAATCAATTGGATGGTGCAATACCAGAAAGCTTAAAAACTCAGGATCCAAGTTCTTTTGCAGGCAACAAAGATCTGTGTGGAAATCCTCTAAGTACCCTTTGCAGCAAAAGCCAAAGCCATGAAGAAGAAAAACCAGAAGAACACAAGCCACGCCGTGTCCTTATTAGTGTTATTGTATTTGTGATTGTGCTTGTATTGGCTTTCATACTAGCACTCTTATTCATCCGTTACCGTAGAAAGAAAACTGCGGCAAAATCCAATTGGAATATAGAGAATTCACAATCACAGTCTCAGAACACAAATGCTAGTATAGTTTCCACTAGCGGAGCCAAATCCATTACAATTGAATCCAAGAAAAACAAAGATGAAGATTTGAACTTCGTTAGCAACGAAAGGGTTGAGTTTGATTTGCAAGATTTGTTAAGAGCCTCAGCTGAGGTTTTGGGAAGTGGAAGTTTTGGATCAACATATAAGGCTATGGTATTGAGTGGACCAGTTGTGGTTGTGAAAAGATTTAAGCACATGAATAAAGTTGGCAAAAAAGAGTTCTATGATCATATGAGAAGGCTTGGAAGTTTGACACATCCTAATCTACTTCCTCTTGTTGCATTCTACTATGGAAAAGAAGAGAAACTTTTGATACATGATTTTGCAGAAAATGGTAGTTTGGCTAGTCATCTTCATGGTAAACATGGTTGTGAGTTGGATTGGCCAACACGTTTGAAGATAATAAAAGGAGTGGCAAGAGGTTTAGCTTACCTTTATAGAGAGTTTCCCGACGAAAAGCTACCTCATGGACATCTAAAATCGTCGAATGTTGTGTTAGACCGTTCATTTGAGCCTCGTTTAACTGAGTATGGACTCGTAGCAGTAACTGATTTGAAACATGCTCAGCAGTTCATGGTAGGCTTCAAGGCTCCAGAGGTGAGTCAAAATGAAGGGCCAAGCGAGAAGAGCGACATATGGTGTTTAGGGATACTAATATTGGAGCTATTGACAGGGAAGTTCCCTGCAAATTATTTGAGGCACGGGAAGGGAGCGACGGAGGATTTGGCAATGTGGGTGGAATCTATAGTGAGGGAAGGGTGGAGTGGAGAAGTGTTGGATAAAAGCATTGGTGGAAGTAGAGGTGAAGAAGGTGAGATGTTGAAGTTGTTGAGGATTGGAATGAGTTGTTGTGAATGGAATTTGGAGAATAGGTTTGGCTGGAAGGAAGCAGTGGCTAAGATTGAGGAGTTGAAGGAAATGGATCATGTTGGTGTTGGAGTTCAGAGTCAGGACTCTGAATTGTCTCTTTGA 1884 0.3806 MLHAREYISILILFMISTFFLPTLIADTDVQILMNFKSFLFNADALNNWSNNSINVCTWNGLICKDQTLHGLRLENMGLSGTINVDILMNLSTLRSFSVINNNFEGPFPAFNKLVGLRALFLANNKFSGEISDDAFEGLRRLRRVVLAENEFKGHIPSSLAQLPRLYDVDLHGNSFYGNIPEFLQSDFRVFNLSNNQLDGAIPESLKTQDPSSFAGNKDLCGNPLSTLCSKSQSHEEEKPEEHKPRRVLISVIVFVIVLVLAFILALLFIRYRRKKTAAKSNWNIENSQSQSQNTNASIVSTSGAKSITIESKKNKDEDLNFVSNERVEFDLQDLLRASAEVLGSGSFGSTYKAMVLSGPVVVVKRFKHMNKVGKKEFYDHMRRLGSLTHPNLLPLVAFYYGKEEKLLIHDFAENGSLASHLHGKHGCELDWPTRLKIIKGVARGLAYLYREFPDEKLPHGHLKSSNVVLDRSFEPRLTEYGLVAVTDLKHAQQFMVGFKAPEVSQNEGPSEKSDIWCLGILILELLTGKFPANYLRHGKGATEDLAMWVESIVREGWSGEVLDKSIGGSRGEEGEMLKLLRIGMSCCEWNLENRFGWKEAVAKIEELKEMDHVGVGVQSQDSELSL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04739 627 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Trre7g04739 627 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 610 IPR046959 -
Trre7g04739 627 Gene3D Transferase(Phosphotransferase) domain 1 413 624 - -
Trre7g04739 627 SUPERFAMILY Protein kinase-like (PK-like) 341 608 IPR011009 -
Trre7g04739 627 Gene3D Ribonuclease Inhibitor 137 233 IPR032675 -
Trre7g04739 627 ProSiteProfiles Protein kinase domain profile. 337 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04739 627 Pfam Protein kinase domain 340 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04739 627 Gene3D Phosphorylase Kinase; domain 1 302 412 - -
Trre7g04739 627 FunFam pollen receptor-like kinase 1 306 412 - -
Trre7g04739 627 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Trre7g04739 627 Gene3D Ribonuclease Inhibitor 28 136 IPR032675 -
Trre7g04739 627 SUPERFAMILY L domain-like 35 208 - -
Trre7g04739 627 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04739 Trre-Chr7 55025663 55028463 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04739 13 608 Receptor kinase-like Gene Family AT4G31250 45.126 0.0 538
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trre7g04739 Pkinase 3.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04739 - - tpra:123914566 1113.6