Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04738 ATGGGAAACCGAGATGTGAAGCTGCTTAACTTTTTATTGAGTCCAGTTGGTCGAAGAGTTGAATGGGCACTAAAACTAAAGGGTGTTGATTATGAGTATTTAGAACAAGATATCTTCAACAAAAGTAGTCTCCTTTTGGAATTGAATCCGGTTCATAAGAAAGTTCCTGTTCTTGTTCATGGCCAGAAATCAATTGCAGAATCATTGATTATCCTTGAATATATTGATGAAACATGGAAGCAGTATCCATTGCTGCCACACCATCCTTATCAAAGATCTCATGCTCGGTTTTGGGCCAAGTTATCTGATGAAAAGCTTGCAATGGGTGCATGGATTGCATTGATTAAGAAAGGGGATGGATGGGAAAAGGTTCTAAAAGAGACAAGAGAAGTAATTGAAAAATTAGAAGAGGAGATAAAAGGAAAAAAATTCTTTGGAGGGGACAATATTGGATACCTTGATCTTGCTCTTGGATGGATCACTTGTTGGCTTCCTGTTTGGGAGGAAATTGGGTCATTGCCGGTACTTGACCCATTAAAATGTCCAAACATTTCTTCATGGAAGACCAATTTTCTTAGCCATCCTATCATCAAAGACAACTTGCCACCTAGGGATGAAATGATTGTTTATTGTCACCGTCGCATACAAGAATATCATGGTTAA 663 0.3831 MGNRDVKLLNFLLSPVGRRVEWALKLKGVDYEYLEQDIFNKSSLLLELNPVHKKVPVLVHGQKSIAESLIILEYIDETWKQYPLLPHHPYQRSHARFWAKLSDEKLAMGAWIALIKKGDGWEKVLKETREVIEKLEEEIKGKKFFGGDNIGYLDLALGWITCWLPVWEEIGSLPVLDPLKCPNISSWKTNFLSHPIIKDNLPPRDEMIVYCHRRIQEYHG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04738 220 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Trre7g04738 220 Pfam Glutathione S-transferase, C-terminal domain 122 195 IPR004046 -
Trre7g04738 220 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Trre7g04738 220 SFLD Main.3: Omega- and Tau-like 2 216 IPR045073 -
Trre7g04738 220 SUPERFAMILY Thioredoxin-like 5 106 IPR036249 -
Trre7g04738 220 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Trre7g04738 220 Gene3D Glutaredoxin 1 84 - -
Trre7g04738 220 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 207 IPR045073 -
Trre7g04738 220 SFLD Main (cytGST) 2 216 - -
Trre7g04738 220 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Trre7g04738 220 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Trre7g04738 220 CDD GST_N_Tau 6 79 - -
Trre7g04738 220 FunFam Tau class glutathione S-transferase 85 220 - -
Trre7g04738 220 Gene3D - 85 218 - -
Trre7g04738 220 Coils Coil 118 138 - -
Trre7g04738 220 FunFam Tau class glutathione S-transferase 1 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04738 Trre-Chr7 55023316 55025008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04738 2 219 Glutathione S-transferase Gene Family AT2G29420 47.248 8.52e-68 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04738 K00799 - tpra:123914566 325.094