Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04729 ATGAAAAGTAAATTCAAAAAACCATATACTCAACAAGAAGAAGACACTGACACATCTCAAGATTCACCTCCTTCTTCCGCCTCATTTGACATCGATGGTTCACTCACTTCCATCTCTTCTTCATCATCTAAGAAAAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCAAGGATCAAGACTAAAAGGAGAGAGCAATACTCCACCATCCGATTCATGGGCATGGAGAAAATACGGTCAGAAACCCATCAAAGGTTCCCCATATCCCAGAGCGTATTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAGGTCGAGAGAAGCCGAGTGGACCCCACAATGCTCGTCATAACATACTCCTCAGACCACAACCACTCATGGCCGGTTTCAAGAAATAATTCAGCAAGACTCGCTGCCAAGAAAATCGAACTAGGCCCAGTCGAACCAGACAAGAAATTTGTCGGCCACTTAGTTGTGGACGACGAGTTGGGGTGGTTGGGAGAGATTGACACAACCTCGTCCGCTATTCTGGAGAGTCCAATTATGGCGGAGTTTGATGCTGACATGGCGTCCATGTTGTTGCCGATGGGAGAAGAGGATGAGTTGCTATTCGCTGATCTTGAAGAATTGCCGGAGTGTTCCACGGTGTTCCGGCATGGGTTGTTCGATGCACGGCAACGGCTAACGGCGCCGTGA 717 0.4798 MKSKFKKPYTQQEEDTDTSQDSPPSSASFDIDGSLTSISSSSSKKRRAIQKRVVQIPIKEPQGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHSWPVSRNNSARLAAKKIELGPVEPDKKFVGHLVVDDELGWLGEIDTTSSAILESPIMAEFDADMASMLLPMGEEDELLFADLEELPECSTVFRHGLFDARQRLTAP 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04729 238 SMART WRKY_cls 74 134 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04729 238 SUPERFAMILY WRKY DNA-binding domain 72 135 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04729 238 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 149 IPR044810 GO:0003700
Trre7g04729 238 Gene3D WRKY domain 64 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04729 238 FunFam WRKY transcription factor 65 44 135 - -
Trre7g04729 238 ProSiteProfiles WRKY domain profile. 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04729 238 MobiDBLite consensus disorder prediction 1 82 - -
Trre7g04729 238 Pfam WRKY DNA -binding domain 76 132 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04729 238 MobiDBLite consensus disorder prediction 15 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04729 Trre-Chr7 54948455 54949476 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04729 7 226 WRKY Transcription Factor Family AT1G29280 53.498 1.58e-75 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g04729 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04729 - - cam:101493438 334.339