Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04728 ATGAAAAGTAAATTCAAAAAACCATATACTCAACAAGAAGAAGACACTGACACATCTCAAGATTCACCTCCTTCTTCCGCCTCATTTGACATCGATGGTTCACTCACTTCCATCTCTTCTTCATCATCTAAGAAAAGCAGGCGAGCCATACAGAAAAGGGTGGTGCAAATCCCAATCAAGGAACCTCAAGGATCAAGACTAAAAGGAGAGAGCAATACTCCACCATCCGATTCATGGGCATGGAGAAAATACGGTCAGAAACCCATCAAAGGTTCCCCATATCCCAGAGCGTATTACAGGTGTAGCAGTTGCAAAGGTTGTCCAGCAAGGAAACAGGTCGAGAGAAGCCGAGTGGACCCCACAATGCTCGTCATAACATACTCCTCAGACCACAACCACTCATGGCCGGTTTCAAGAAATAATTCAGCAAGACTCGCTGCCAAGAAAATCGAACTAGGCCCAGTCGAACCAGACAAGAAATTTGTCGGCCACTTAGTTGTGGACGACGAGTTGGGGTGGTTGGGAGAGATTGACACAACCTCGTCCGCTATTCTGGAGAGTCCAATTATGGCGGAGTTTGATGCTGACATGGCGTCCATGTTGTTGCCGATGGGAGAAGAGGATGAGTTGCTATTCGCTGATCTTGAAGAATTGCCGGAGTGTTCCACGGTGTTCCGGCATGGGTTGTTCGATGCACGGCAACGGCTAACGGCGCCGTGA 720 0.4806 MKSKFKKPYTQQEEDTDTSQDSPPSSASFDIDGSLTSISSSSSKKSRRAIQKRVVQIPIKEPQGSRLKGESNTPPSDSWAWRKYGQKPIKGSPYPRAYYRCSSCKGCPARKQVERSRVDPTMLVITYSSDHNHSWPVSRNNSARLAAKKIELGPVEPDKKFVGHLVVDDELGWLGEIDTTSSAILESPIMAEFDADMASMLLPMGEEDELLFADLEELPECSTVFRHGLFDARQRLTAP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04728 239 SUPERFAMILY WRKY DNA-binding domain 73 136 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04728 239 MobiDBLite consensus disorder prediction 15 45 - -
Trre7g04728 239 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 150 IPR044810 GO:0003700
Trre7g04728 239 SMART WRKY_cls 75 135 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04728 239 FunFam WRKY transcription factor 65 52 136 - -
Trre7g04728 239 MobiDBLite consensus disorder prediction 1 80 - -
Trre7g04728 239 Gene3D WRKY domain 65 137 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trre7g04728 239 ProSiteProfiles WRKY domain profile. 76 136 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trre7g04728 239 Pfam WRKY DNA -binding domain 77 133 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04728 Trre-Chr7 54948455 54949476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04728 7 227 WRKY Transcription Factor Family AT1G29280 53.909 8.99e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trre7g04728 WRKY 1.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04728 - - cam:101493438 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04728 7 54948455 54949476 Trre7g04728 7 54948455 54949476 ECH