Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04715 ATGCCTGATATATGTACTTTGGAACCGTGCAGGTCTAAGCTCAACCGGTTAAATTTCCAGGGTTTCTATACCATACTTCTAGAAAGAAATGAAGAGTTGATTAGTGTGGCAACTATTAGGATATTTGGAGAGAAGATAGCAGAAGTTCCCCTTGTCGGTACAAGATTTCAGTATAGACGACTTGGAATGTGTCGTGTTTTAATGGATGAGCTTGAAAAGTATCAAATTTCTCACTTGAATTGTTTTCTTTTGTCAGAAACTAAGCAACTGCGAGTGGAGAGACTAGTCTTACCTGCTGTCCCTGGTGTGCTTGAAACTTGGACCAGTTCTTTTGGTTTTAAGCAGATGACAAACTTTGAGCGATCGCAGTTTTTGGACAACTCATTCCTAGATTTCCAAGGAACGGTGATGTGTCAGAAACTGTTGTCAAGACATCCATCTCCGGTATCAGATGTGACTAGAGACGCAACAACTCCAAAACAATATGGTGGCTTTTCTGTAAAATGTAAAATTAATTTTGAAAAGGCTAGTCCGGTTTTTGAAGTCGATCGAGCTGAAGGGATTAGAAAGAGTAGTACAAAGGATTTACAAGTTTGGAGACCAATGCCTAATTCCTAG 618 0.3964 MPDICTLEPCRSKLNRLNFQGFYTILLERNEELISVATIRIFGEKIAEVPLVGTRFQYRRLGMCRVLMDELEKYQISHLNCFLLSETKQLRVERLVLPAVPGVLETWTSSFGFKQMTNFERSQFLDNSFLDFQGTVMCQKLLSRHPSPVSDVTRDATTPKQYGGFSVKCKINFEKASPVFEVDRAEGIRKSSTKDLQVWRPMPNS 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04715 205 PANTHER PHD FINGER PROTEIN 12 9 157 IPR042163 GO:0003714|GO:0045892
Trre7g04715 205 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 80 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04715 Trre-Chr7 54838256 54839282 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04715 7 142 PHD Transcription Factor Family AT1G05380 42.647 2.76e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04715 - - gmx:102661511 241.121