Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04711 ATGTCAAAGTTACAAATTCTTGATCTCTCTGAAAATTCTTTACAAGGCCATGTTCCAAGCTGGTTTTGGTCTAGTTTTTTATCATTATTTGAAGTGAATCTCTCAAGAAACAAATTTGGAGGAAGCATCATCAATAACACCTCGTTTTTAATTTCAACCATTCAAAAACTCAATCTCTCACACAACAGGTTCAATAACATAGTTCAACTTTCTAGCTTCCAAAACCTTAAAATCCTCGACCTTTCACACAACAACCTAAGAACACTTCCTTTAGGTTTTCAAAACCTTACCAAACTACAACATGTTGATCTTTCAAGCTGCAATCTCAAAGATAACATAAAACAGACAATTTCTTCTGTACACTCACTTCAGTACTTGGATTTATCAAACAACAATTTAACCGGTAATTTCCCTTCTGATTTTCCACCACTTAACAACCTTAAATTCCTCAACATTTCAAACAACAACTTCATCTATAACAACAACACTCCAAACCAAAATCAAAATCAAGTCATCTTTCATAGAAAACAAACCAAACCCAAATCAAAAAAATTGATTCTTGCAGTATGTTCTACACTTGCAACACTTGTTATAGCGATAATTTCCATCTGGGTAATCCTAATTATTCACAGAAAGAGGAAACAACGTTCTAAGAAGAAGAAATGGGCAATTTCATTACCGGTTATGATGAACACGATGAACACGAAAGTAGAGAAAACAGGGCCATTTGAATTTGAAACAGAGTCAGGTTCAACATGGGTTGCAGATGTAAAAGAACCAACATCTGCACCAGTAGTGATGTTTGAGAAGCCATTGATGAACTTCACCTTCAAGGATCTAATCATTGCCACGTCACATTTCGGGAAAGAATCACAGTTAGCAGAAGGAAGGTGTGGACCTGTGTATTGGGCTGTTTTACCTGGTGAAATCCACGTGGCGATTAAGGTTCTTGAACATGCGAGAGACGTTGATTATGATGACTCTGTTGCTATGTTCGTTGACTTGGCGAAGTTGAAACATCCTAATTTGTTGACTCTCTCTGGGTACTGTATTGCAGGTAAAGAGAAGCTAGTGCTATATGAGTTTATGGCAAACGGCGATTTAGGTCGATGGCTACATGAACTTCCAACCGGGGATACCAACGTCGAGGATTGGACTGACGACACATGGGAGTTCCAAACCGGCGTGGTTGAAGCATCCCCAAAAAAGATGGGTTGGTTGACACGCCACCGTATTGCGGTGGGGATAGCACGTGGCCTTGCATATCTTCACCATGCGAGTTCAAAACCTGTTGTGCATGGACACCTCGTTACCTCCAACATTTTGCTCACTGATAATTTTGAGCCTCGAATCTCCGATTTTGGACTGCAAATCAACTCGAGTTCCAATGGTGGCATTGAAGATGATGTGTACTGCTTTGGAGTGGTGTTGATGGAGCTACTTACCGGGAGGATCGGCACAACAGAGACAATTGTTGCAGTTAGAAAGGCACTGAGGGAGGAACAACATGTTAGAGTGCTTGATGAGAGGTTGCTACTCGAAGGCGACCCAATGGTGAGCGAGATGGTGGAGAGCCTCATAATCGCTTTTTTGTGCACGGCTGAGTCGCCTTCCAAGAGACCCACCATGCAACAAGTTTTGGGATTACTCAAAGATATTCATCCCCATGAACCATCATTCTAA 1683 0.4088 MSKLQILDLSENSLQGHVPSWFWSSFLSLFEVNLSRNKFGGSIINNTSFLISTIQKLNLSHNRFNNIVQLSSFQNLKILDLSHNNLRTLPLGFQNLTKLQHVDLSSCNLKDNIKQTISSVHSLQYLDLSNNNLTGNFPSDFPPLNNLKFLNISNNNFIYNNNTPNQNQNQVIFHRKQTKPKSKKLILAVCSTLATLVIAIISIWVILIIHRKRKQRSKKKKWAISLPVMMNTMNTKVEKTGPFEFETESGSTWVADVKEPTSAPVVMFEKPLMNFTFKDLIIATSHFGKESQLAEGRCGPVYWAVLPGEIHVAIKVLEHARDVDYDDSVAMFVDLAKLKHPNLLTLSGYCIAGKEKLVLYEFMANGDLGRWLHELPTGDTNVEDWTDDTWEFQTGVVEASPKKMGWLTRHRIAVGIARGLAYLHHASSKPVVHGHLVTSNILLTDNFEPRISDFGLQINSSSNGGIEDDVYCFGVVLMELLTGRIGTTETIVAVRKALREEQHVRVLDERLLLEGDPMVSEMVESLIIAFLCTAESPSKRPTMQQVLGLLKDIHPHEPSF 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04711 560 Pfam Protein tyrosine and serine/threonine kinase 290 460 IPR001245 GO:0004672|GO:0006468
Trre7g04711 560 FunFam Putative LRR receptor-like serine/threonine-protein kinase 248 362 - -
Trre7g04711 560 ProSiteProfiles Protein kinase domain profile. 287 557 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04711 560 Gene3D Transferase(Phosphotransferase) domain 1 363 461 - -
Trre7g04711 560 Gene3D Transferase(Phosphotransferase) domain 1 462 558 - -
Trre7g04711 560 SUPERFAMILY L domain-like 2 160 - -
Trre7g04711 560 ProSiteProfiles Leucine-rich repeat profile. 53 74 IPR001611 GO:0005515
Trre7g04711 560 SUPERFAMILY Protein kinase-like (PK-like) 261 548 IPR011009 -
Trre7g04711 560 Gene3D Phosphorylase Kinase; domain 1 247 362 - -
Trre7g04711 560 Gene3D Ribonuclease Inhibitor 1 167 IPR032675 -
Trre7g04711 560 Pfam Leucine Rich Repeat 122 141 IPR001611 GO:0005515
Trre7g04711 560 PRINTS Leucine-rich repeat signature 76 89 - -
Trre7g04711 560 PRINTS Leucine-rich repeat signature 120 133 - -
Trre7g04711 560 Pfam Leucine rich repeat 53 109 IPR001611 GO:0005515
Trre7g04711 560 ProSiteProfiles Leucine-rich repeat profile. 75 97 IPR001611 GO:0005515
Trre7g04711 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 2 190 - -
Trre7g04711 560 SMART LRR_typ_2 120 143 IPR003591 -
Trre7g04711 560 SMART LRR_typ_2 73 95 IPR003591 -
Trre7g04711 560 SMART LRR_typ_2 1 24 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04711 Trre-Chr7 54807236 54811040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04711 1 553 Receptor kinase-like Gene Family AT5G07280 31.240 4.00e-70 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Trre7g04711 PK_Tyr_Ser-Thr 1.8e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04711 - - gmx:100809704 751.51