Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04706 ATGACTGATGGAAATGAGAAGAGTGAGGAACATGGTGAGGACTCTTCAATGGGATCTTCACATAAATGTTCAATATCATTTGATTTGAATGAAGAAGCTACATGTGAGAATAATGAAGACAATGGTGATGGTGATGATGATGATGATGAGAAAACAAAGGATGATAATGATAATGATAATGATGAAGGTACTTCAAGTTCAACAAAAAGAAGTAGTGGATCAAATGAAAGAAGAAATGGTGTAAGACAATATGTTAGATCAAAGATGCCTAGACTTAGATGGACTCCTGATCTTCATCACTCCTTTGTGCATGCTGTTGAAAGGCTTGGAGGCCAAGAGAGAGCAACACCCAAATTGGTGCTTCAACTGATGAATGTGAGAGGACTAAGCATTGCTCATGTCAAGAGTCACTTGCAGGTATATAAGACAAAATTTGAGATGTACCGGAGCAAAAAACTTGACGAGGTTGGACAAGTGCTAAGTTCAACACAAAGATCAACACATGAACTAGGTTCCATTTCTCATGTAGCCCATCAATATTCCATGATGCCTCATCAACATTTCAAGATGGCAAATGGTGGAATTGTTCTAGAAACTAATTACAACCAAAATAGTTATAATTTCCATAGTCTCCTTCATCCCTCATCCTTGTCACATTCAAAGCCCATCAATTCAAGGCACAATCAATGGTACTTAAACCATCAACCTTTGAGACCAAGCTATGTGAGCAATGAAGTTGTCTCCTCCTCAACAGCCTTACATACGCTACAAGGAAAATCATCGGTAGCTTCGAACCAACAGCTTCAAGTAATGGATTCTACGGCCAATACCACACTTGCTCCCATGAGACCAAGCCAATTTCTTGAAGAGAAAAGATGGCCTCCATTAGATATAATGAACAATCATCAATATTTGAAGAAAAATTTACATACCATTACCAATGTTTCTACTTTTGGCTCAACTACAACATCACTTAGACCAGCTGAATTGAGCTTTGGAAACAACATAAGATTCAGGGAGCATCTATCAAACATCAATGAACACCAAAATTCTTTCAATAATTCAAAGCTTCAATTTGATCCCCCATTTCGGATTAAGTTGAATGAAGAAACATTGGAGAAAGACAAAAAATGGGTGCCTGATTTGCAACTGAGTTTAAGTCAAACAAATAGCAACAATGATGGCAAGAGTGATCTTGGTTTCAGAGAAACCAAAGAAATCAACACGAAACTCTCACTTTCTTAG 1245 0.3759 MTDGNEKSEEHGEDSSMGSSHKCSISFDLNEEATCENNEDNGDGDDDDDEKTKDDNDNDNDEGTSSSTKRSSGSNERRNGVRQYVRSKMPRLRWTPDLHHSFVHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQVYKTKFEMYRSKKLDEVGQVLSSTQRSTHELGSISHVAHQYSMMPHQHFKMANGGIVLETNYNQNSYNFHSLLHPSSLSHSKPINSRHNQWYLNHQPLRPSYVSNEVVSSSTALHTLQGKSSVASNQQLQVMDSTANTTLAPMRPSQFLEEKRWPPLDIMNNHQYLKKNLHTITNVSTFGSTTTSLRPAELSFGNNIRFREHLSNINEHQNSFNNSKLQFDPPFRIKLNEETLEKDKKWVPDLQLSLSQTNSNNDGKSDLGFRETKEINTKLSLS 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04706 414 MobiDBLite consensus disorder prediction 65 80 - -
Trre7g04706 414 FunFam Myb family transcription factor 88 146 - -
Trre7g04706 414 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 69 220 IPR046955 GO:0003700
Trre7g04706 414 MobiDBLite consensus disorder prediction 1 17 - -
Trre7g04706 414 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 146 IPR017930 -
Trre7g04706 414 NCBIfam myb-like DNA-binding domain, SHAQKYF class 90 144 IPR006447 GO:0003677
Trre7g04706 414 MobiDBLite consensus disorder prediction 33 56 - -
Trre7g04706 414 MobiDBLite consensus disorder prediction 18 32 - -
Trre7g04706 414 MobiDBLite consensus disorder prediction 1 87 - -
Trre7g04706 414 Pfam Myb-like DNA-binding domain 92 142 IPR001005 -
Trre7g04706 414 SUPERFAMILY Homeodomain-like 88 145 IPR009057 -
Trre7g04706 414 Gene3D - 89 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04706 Trre-Chr7 54782588 54786015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04706 19 154 G2-like Transcription Factor Family AT2G42660 51.471 2.58e-32 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre7g04706 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04706 - - mtr:11419043 578.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04706 7 54782588 54786015 Trre7g04706 7 54782588 54786015 ECH