Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04704 ATGGAATGTATATGCAATGGATTTGGGTTTTGGCTCAGGATTTATGTTGGATTGATTTCTCTTTGCGCAATTCAACAGTGCTGGGCGCTTAATGATGAAGGAATTGCTTTGTTGGAATTTCGAGAAAGAATAACTTCTGATCCTCATGGCGCTCTGGTAAATTGGAATCCAAATGATTCCGACCCTTGCAAGTGGTGGGGTGTTCGTTGTGTTGACGGTAAAGTGCAAATGCTGGACCTAAATGGGCTATCATTGGAAGGGGAATTAACTCCTCATCTTGGGAAACTTAGTCAGTTAAAATCTCTTGTGCTGTGCAAGAACAATTTTTCTGGCACCATTCCGAAAGAACTTGGAGATCTAGACAATCTGGAGCTGTTGGATTTAAGGGGGAATAACTTAACTGGAAATATCCCATCAGAAATTGGCAGGTTATTGTTGTTAAAACAATTGTTGGTTCATGACAACAAAATTGAAGGCAGCGATTCTCTAGAGCTTGGGAACATGCCTTCTAAATCACTACTTATTGACAACTATTCATCAGCTCTGACAAGTTTGTATCACTGCAAGCATAGAAAGTTTGCACACTGCTTGTGGTATAGAGATCTCAAGCAATTGAACAAGGTAGATTCTTTGGCTGTTCCAATTAAAGGAGCACTTAAAAGATACTTTAATGCCATGGCACTGCCGTTGTTCAAGCTAGGAAAGGCTACCTCTGATGGCTACGAAGAGAATTACTGTGCCGACCTTCCTAGTACTGACGAGTCGGAGGTTGACTCAAATTTATCAAATATAAACAGTTCTGCACGTCGTAAGTTGCTTGATCAGTCCAGTAACCTTGCAGCTGCATCTTATAGTGGGCCTGCTATACAGATCAGTTATCTTCCTATTACCATTAGTAGTGGATCTTTCCCGGCTGTGCCAGATGCCAATAAGAAACAAAAGCAGTCAGCTGCACCGCTAGATTCACCTATTGTTTCTCCACAAGATATTCAAATAAGTCAACCAAATTCAGCTAGTGGTGCTCCAAGTAAACTCTGGAAATATATTATCATTATCTCTTGTGTGGTTTTCTTGGTCCTTTTTATTGTGCTAGTGCTTTGCATCTATCGAAAACGAGCTGCAAAAGTAATAAAGCCCTGGAAGACAGGAATAAGTGGGCAGCTGCAGAAAGCATTTGTAACAGGGGTCCCGAAGTTGAATCGATCGGAGTTGGAGACAGCCTGTGAAGATTTCAGCAATATCATTAACAGTTTTGAGAAGTGTACCATATATAAAGGAACATTGTCCAGTGGAGTTGAGATTGCTGTTGATTCTACTATTGTTACTTCTACCGAGGAGTGGTCAAAGAACATGGAAATGACCTATAAGAGAAAGATTGCTGCTCTATCCCGTGTTAACCATAAGAACTTTACCAATCTTATTGGTTACTGTGACGAAGAAGAACCATTCACAAAGATGATGGTGTTTGAGTATGCTCCAAATGGAAGCTTATTCGAGCATCTACATGTTAAGGAAGTTGAACATCTTGATTGGAGTGCAAGAATGAGGGTTATCATGGGAACAGCTTATTGTCTTCAGTACATGCACCATGATCTGAATCCACCAGTATCTCATTCCAACCTTAATTCAGTTTCTATATTATTAACAGACGACTTTGCTGCTAAGATTTCCGAGATCAGTTTTGGCCGCAATGGATTATCAGCCAGCACAACTGGAGACGAATCAAAGAAATTCGAGTTGCCACCCCAACAAGGTCCTGAAACCGATGTCTATAACTTTGGAGTATTGTTACTTGAAATCATTTCTGCGAAACTGCCTTACTCTGAAGAACAAGGTCACCTTGTAAATTGGGCCTCTGAGTACTTGAATGACAAGCGAAACATCGGCTGTTTGATCGATCCGACGCTCGAGTCCTTTAAAGACAATGAACTTGATGTGATATGTGATGTGATAAAAGAATGTATTCAATCTGATCAAAGGTTAAGACCAACAATGCAGGAAATAACTTGCAAATTGAGAGAAGTGCTTTCTATATCGCCCGAGCAAGCAGTCCCGAGACTTTCTCCACTCTGGTGGGCTGAATTGGAGATCTTATCAGTGGAGGCCACTTAA 2112 0.4091 MECICNGFGFWLRIYVGLISLCAIQQCWALNDEGIALLEFRERITSDPHGALVNWNPNDSDPCKWWGVRCVDGKVQMLDLNGLSLEGELTPHLGKLSQLKSLVLCKNNFSGTIPKELGDLDNLELLDLRGNNLTGNIPSEIGRLLLLKQLLVHDNKIEGSDSLELGNMPSKSLLIDNYSSALTSLYHCKHRKFAHCLWYRDLKQLNKVDSLAVPIKGALKRYFNAMALPLFKLGKATSDGYEENYCADLPSTDESEVDSNLSNINSSARRKLLDQSSNLAAASYSGPAIQISYLPITISSGSFPAVPDANKKQKQSAAPLDSPIVSPQDIQISQPNSASGAPSKLWKYIIIISCVVFLVLFIVLVLCIYRKRAAKVIKPWKTGISGQLQKAFVTGVPKLNRSELETACEDFSNIINSFEKCTIYKGTLSSGVEIAVDSTIVTSTEEWSKNMEMTYKRKIAALSRVNHKNFTNLIGYCDEEEPFTKMMVFEYAPNGSLFEHLHVKEVEHLDWSARMRVIMGTAYCLQYMHHDLNPPVSHSNLNSVSILLTDDFAAKISEISFGRNGLSASTTGDESKKFELPPQQGPETDVYNFGVLLLEIISAKLPYSEEQGHLVNWASEYLNDKRNIGCLIDPTLESFKDNELDVICDVIKECIQSDQRLRPTMQEITCKLREVLSISPEQAVPRLSPLWWAELEILSVEAT 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04704 703 ProSiteProfiles Protein kinase domain profile. 374 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04704 703 Gene3D Transferase(Phosphotransferase) domain 1 492 684 - -
Trre7g04704 703 SMART serkin_6 346 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04704 703 Gene3D Phosphorylase Kinase; domain 1 378 491 - -
Trre7g04704 703 FunFam Inactive receptor-like serine/threonine-protein kinase 383 491 - -
Trre7g04704 703 Gene3D Ribonuclease Inhibitor 29 217 IPR032675 -
Trre7g04704 703 SUPERFAMILY Protein kinase-like (PK-like) 395 670 IPR011009 -
Trre7g04704 703 Pfam Protein tyrosine and serine/threonine kinase 422 672 IPR001245 GO:0004672|GO:0006468
Trre7g04704 703 PANTHER PROTEIN MALE DISCOVERER 2 18 701 - -
Trre7g04704 703 SUPERFAMILY L domain-like 28 170 - -
Trre7g04704 703 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Trre7g04704 703 FunFam Nuclear pore complex protein NUP107 30 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04704 Trre-Chr7 54767930 54772211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04704 74 675 Receptor kinase-like Gene Family AT5G56040 25.954 2.02e-45 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Trre7g04704 PK_Tyr_Ser-Thr 4.6e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04704 - - gmx:100808098 981.859