Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04703 ATGGCAGTTGTAGCTGCTCCAAAGAAAACAAACTCAATCAACAAAAAAGATAATCCAAATCTTCTCTTAGGTCGTTTCGAATTAGGTAAACTTCTCGGCCATGGAACTTTCGCGAAAGTTCATCTTGCTAAGAACATCAAAACAGGTGAATCAGTAGCAATTAAGATCATAAGCAAAGATAAAATCCTCAAAAGCGGTTTAGTTTCACACATCAAACGTGAAATCTCAATTCTCCGTCGTGTTCGTCACCCTAACATCGTTCAACTTTTTGAAGTCATGGCTACAAAAACAAAGATCTATTTCGTTATGGAATATGTTCGTGGTGGTGAACTTTTCAATAAAGTTGCTAAAGGTAGGTTGAAAGAAGAAGTTGCTAGAAAATATTTTCAACAATTGATTTGTGCTGTTGGTTTTTGTCATGCTAGAGGTGTTTATCATAGAGATTTAAAACCTGAAAATTTGTTACTTGATGAAAATGGTAATTTAAAAGTTTCTGATTTTGGATTAAGTGCTGTTTCGGATGAAATTAAACAAGATGGTTTGTTTCATACTTTTTGTGGTACACCTGCTTATGTTGCTCCTGAGGTTTTATCTAGGAAAGGTTATGATGGTGCTAAGGTTGATATTTGGTCTTGTGGTGTTGTTTTGTTTGTTTTGATGGCTGGTTATTTACCTTTTCATGATCCTAATAATGTTATGGTTATGTATAAGAAGATTTATAAAGGTGATTTTAGGTGTCCTAGATGGTTTTCACCTGAGCTTGTTAATCTTCTTACTAGGTTACTTGATATTAAGCCGCATACTAGGATTTCCATTCCCGAGATTATGGAGAATCGTTGGTTTAAGATAGGTTTTAAGAGTATTAAGTTTTATGTTGAGGATGATGTTGTTTGTAATGTTGATTCTATTGAATTTGATGATGGTGGTGGTGTTGGTGATAATAAGGTAGTCAATTTCGATGATCATGTTGTTGATGAGGTGTTAGAATCGGTATCGGAATCGGAATGGGATCCTGAGGTTTTGAGTAGAAGGAATAGCCGTGCTCGTGCTTCGTTGCCGAGGCCTGCAAGTTTGAATGCTTTTGATATTATATCGTTCTCGCAAGGTTTTGATCTTTCTGGTTTGTTTGAGGAAAAGGGTGACGAAGCAAGGTTTGTGTCTAGTGCGTCGGTGCCGAAGATTCTATCAAAATTGGAGGAAGTTGCTCATTTGGTTAGGTTCAATGTAAGGAAGAAAGATTGCAGGGTTAGCTTGGAGGGTTCTAGAGAAGGGGCAAAAGGGCCGTTGACTATTGCTGCCGAGGTATTCGAATTGACGTCTTCTTTGGTGGTGGTGGAAGTGAAGAAAAAAGGAGGGGATAAGGCAGAATATGAGAAATTTTTAAACACTGAATTGAAGCCGGCTTTGCATAGTTTAATCGTCGAGGAGGAATCTGCAGGTTCTTCAAGTCAAACTACACCAGATGAATCTTTGCAGCAACGTGCATTTTCTGATTCCGCCATCGACAAACATTCAGATAGTATTGAAGCTCTCAGCTTAGAAAACTGA 1548 0.3773 MAVVAAPKKTNSINKKDNPNLLLGRFELGKLLGHGTFAKVHLAKNIKTGESVAIKIISKDKILKSGLVSHIKREISILRRVRHPNIVQLFEVMATKTKIYFVMEYVRGGELFNKVAKGRLKEEVARKYFQQLICAVGFCHARGVYHRDLKPENLLLDENGNLKVSDFGLSAVSDEIKQDGLFHTFCGTPAYVAPEVLSRKGYDGAKVDIWSCGVVLFVLMAGYLPFHDPNNVMVMYKKIYKGDFRCPRWFSPELVNLLTRLLDIKPHTRISIPEIMENRWFKIGFKSIKFYVEDDVVCNVDSIEFDDGGGVGDNKVVNFDDHVVDEVLESVSESEWDPEVLSRRNSRARASLPRPASLNAFDIISFSQGFDLSGLFEEKGDEARFVSSASVPKILSKLEEVAHLVRFNVRKKDCRVSLEGSREGAKGPLTIAAEVFELTSSLVVVEVKKKGGDKAEYEKFLNTELKPALHSLIVEEESAGSSSQTTPDESLQQRAFSDSAIDKHSDSIEALSLEN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04703 515 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Trre7g04703 515 FunFam Non-specific serine/threonine protein kinase 16 330 - -
Trre7g04703 515 ProSiteProfiles Protein kinase domain profile. 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04703 515 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 465 - -
Trre7g04703 515 MobiDBLite consensus disorder prediction 476 515 - -
Trre7g04703 515 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04703 515 MobiDBLite consensus disorder prediction 499 515 - -
Trre7g04703 515 CDD STKc_SnRK3 25 280 - -
Trre7g04703 515 FunFam Non-specific serine/threonine protein kinase 355 473 - -
Trre7g04703 515 SUPERFAMILY Protein kinase-like (PK-like) 22 282 IPR011009 -
Trre7g04703 515 MobiDBLite consensus disorder prediction 476 498 - -
Trre7g04703 515 ProSiteProfiles NAF domain profile. 353 377 IPR018451 GO:0007165
Trre7g04703 515 SMART serkin_6 26 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04703 515 CDD CIPK_C 359 469 - -
Trre7g04703 515 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Trre7g04703 515 Gene3D Transferase(Phosphotransferase) domain 1 16 306 - -
Trre7g04703 515 Pfam NAF domain 355 411 IPR004041 GO:0007165
Trre7g04703 515 FunFam Non-specific serine/threonine protein kinase 17 105 - -
Trre7g04703 515 Gene3D Kinase associated domain 1, KA1 355 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04703 Trre-Chr7 54764183 54765730 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04703 8 490 CBL-interacting serine-threonine protein kinases AT4G18700 71.694 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Trre7g04703 Pkinase 7.6e-74 CL0016