Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04688 ATGGCTATGTCCTGCGGAGGATTAATCATCTTCGCTGCCTTTGTAACATTAATATGCGTGTATGTCTTTTCTTGGCCGTTCATTGCCATCACTGGTACATGTCCCATTCCATTAGAAAAACCCTGCGGAATCATATTCAATGAATCACATCTTTCATTTGGAGATGGGTGTGTGAATCCTAGATTCGAAGTAATATGTGAAAACAATAAATCGGTAATGTACTTCAACTATGGCCAACATCACCAAGATGCCATTATAGCTTCTTATTCCTCCTCGTTCCGTTACATCATGACCGGAGATAATAGATGCAGCCCTATCATCAATTCCTTTTCTCTACCATACGAAAACATCTCCTTCTTTAATGATCCTCAGGTTCAAGAAGAATATATAGCGGTTATGAGATGCCATAAAGCTGTAAATGATGGCAACTATTGGGATATCTCTTCAGAGATGTGTGGATATACAAAAAAACAGTATTATTATTCATATGTTGTTGCGAACGGTTTTAACTACCCAGATTTTGCTGTGAGAAATATAGAAGAGTCATGCAGAATAGTGATGAAGGTAATGGTGAAAAGGTGGGATGAAAAGGTGAAATGCAATAGCATGTGTGAGTATCCAGAGGTTCACAGTGAGTATGTGAATGGAATTGAGATTCGTTGGCGAGCAATACGGTGTGAGGAAGACAGTCACAGTGACAAAGAGAGTGATTGGTATGGGCAAAGGAAACAACCACTCCACTGCATTCTCTTCAATGTAGCACTCACCTGTCTTGAAACTGGAATCCCGATACTCCTATGGATTGTTGGAAAATTTGTTCTTGGGGCACCCTTGGTGGTTGCAGTCTTGATATGTAAATGGAGGAAAAAACGTTTATCCATATATGATACGGTTGAAGATTTTATCCAAAGTCACAACAATTTCATTCCTATCAGATACTCTTACTCTCAAATCAAAACAATGACAAAACGTTTCAAGAATAAGTTGGGTGAAGGAGGCTATGGTTGTGTCTATGAAGGAGAGCTTCGAAGTAAACGCAAAGTAGCTGTTAAGGTATTGACCAAGTCTCAAACCAATGGACAAGACTTCATCAACGAAGTTGCAACAATTGGAAGAATCCGTCATGTCAATGTCGTGCAGCTAATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTTTGATCTACAAGTTCATGCCTAATGGTTCTCTTGATAAACACACATTTTCACAAGAGCAAGGAAATTCATCCACATTAAGCTACGATAAAATCTATGAAATTTCTCTTGGAATTGCTCGTGGAATGCAATACTTACATCAAGGTTGTGACATGCAAATCATACATTTCGATATAAAACCGCATAACATTCTTCTTGATGAGAATTTCAACCCGAAGATATCCGACTTTGGTTTGGCGAAGTTGTACCAAATACATCAAAGCATTTTAACATTAACTGCAGCAAGAGGAACAATGGGGTACATGGCTCCTGAGTTGCTGTACAAGAACATCGGAAACCTTTCTCACAAAGCTGATGTTTATAGTTTTGGAATGATGCTAATGGAAATGGCAGGAAGAAAAAAGAACAGAAATTATATAGAGAATTGTTGGCAAGACTATTTTGCTAAATATATTTATGATCAATTTGAGGAAACAATAGATACAAACAATGGAACAGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCATTGAAATGCATACAAATGAAGCCAGATGATCGTCCCTCAATGAATGAAGTGATAGATATGCTCGAAGGGGATGAAATGCCTCAACATCTTCCACCTGATCCTGAATCTCTCTTAACCTGGCAAAGGATGTCGGCAGATGCAAATGAATTGGATGATAGCTTGCATTCAGCATGA 1887 0.3842 MAMSCGGLIIFAAFVTLICVYVFSWPFIAITGTCPIPLEKPCGIIFNESHLSFGDGCVNPRFEVICENNKSVMYFNYGQHHQDAIIASYSSSFRYIMTGDNRCSPIINSFSLPYENISFFNDPQVQEEYIAVMRCHKAVNDGNYWDISSEMCGYTKKQYYYSYVVANGFNYPDFAVRNIEESCRIVMKVMVKRWDEKVKCNSMCEYPEVHSEYVNGIEIRWRAIRCEEDSHSDKESDWYGQRKQPLHCILFNVALTCLETGIPILLWIVGKFVLGAPLVVAVLICKWRKKRLSIYDTVEDFIQSHNNFIPIRYSYSQIKTMTKRFKNKLGEGGYGCVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALIYKFMPNGSLDKHTFSQEQGNSSTLSYDKIYEISLGIARGMQYLHQGCDMQIIHFDIKPHNILLDENFNPKISDFGLAKLYQIHQSILTLTAARGTMGYMAPELLYKNIGNLSHKADVYSFGMMLMEMAGRKKNRNYIENCWQDYFAKYIYDQFEETIDTNNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNEVIDMLEGDEMPQHLPPDPESLLTWQRMSADANELDDSLHSA 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04688 628 Gene3D Transferase(Phosphotransferase) domain 1 398 600 - -
Trre7g04688 628 ProSiteProfiles Protein kinase domain profile. 323 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04688 628 SMART serkin_6 323 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04688 628 FunFam PR5-like receptor kinase 398 603 - -
Trre7g04688 628 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Trre7g04688 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Trre7g04688 628 SUPERFAMILY Protein kinase-like (PK-like) 303 593 IPR011009 -
Trre7g04688 628 Gene3D Phosphorylase Kinase; domain 1 299 397 - -
Trre7g04688 628 FunFam serine/threonine-protein kinase PBS1-like 291 397 - -
Trre7g04688 628 Pfam Protein kinase domain 326 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04688 628 PANTHER RUST RESISTANCE KINASE LR10-RELATED 295 611 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04688 Trre-Chr7 54615758 54617766 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04688 256 605 Receptor kinase-like Gene Family AT1G66910 44.536 2.30e-97 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre7g04688 Pkinase 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04688 - - tpra:123914142 888.256