Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04687 ATGGCTATTTGGCTAAAAAAACTCATCCATGTGTTCTTGTTCTGCTTCTTAATAGTGGTTGTATTTGCAGAAACTAGTTCCTCTGATGACCAATGCAAAGAATCAAGTTGTGATGGTATCCATGGACCATTCATAAGATTCCCCTTTAGACTCAAAGGCAAACAACCAAAATGGTGTGGCTACAATAATTCCTGGTATGAACTGTACTGCACCGATACCAACCAAACAGTGTTGGAACTCCCCTTCTCTACAAAAACCATTGTCAAAACCATAAACTACACCTCACAAGCCATACCAGTATCTTATCCTGAATTCTGCCTTCACAATCAGATTCCTAATTTCGATATATCCTCATCTCCTTTTCAGTTCAACGATGACTTTGGACTCGGCGAATATGCTTTATTCAATTGTTCAGGGACTTCTCACAGAAACACAGATGACAGTTATAATATAGTAACATCTGGAAACTTTTCTTGTCTAAATGTTCCGGGATTTGAAGTTATAGCAGTGGAGTCCTGGTCTTCAATAATTTGGACACCCTTGTTGTCCTGCACCAAAATACAAAACCTTGTATTGTTACCTAATTCTTTATTTAACAACAACGTTGATGCAGGTCTCAATTGGTTTCAACCAAATTGCAGAAACTGTGAGCAAAAAGGTGGGCAATGCAAGGCCAAAAGAAACACATCTCAACACAAATTTGAATGCATAGGCATCATTAAAGGTTCATCAGAAGGGAAAGTGATTGCTGGTGGAATCTTAGGCCCATTTTCTCTGATATTTGTTGGAGTCACATCGTACTGTATCTATGTAGTTTTCATTGAAAGGAAGAATTACATAAGAATCAAAAAGTTTTTGAAGGATTATAAAGCTCTTAAGCCTGCCAGATACTCTTATGCAGATATAAAAAGAATTACAAATCAGTTTAAGGAAGAACTAGGGCAGGGAGCTTTTGGATCTGTCTTCAAAGGAAAGCTATCAAGCGAAGTTCAAGTAGCTGTTAAGGTCCTAAACACTTCAACAGGAAATGGCCAAGAGTTCATCAATGAAATGGAAACAATGTGTCAAATTCACCATGTCAACGTGGCTCGCTTGGTTGGCTTTTGTGCAGATGGACATAGACGAGCCTTGGTGTATGATTTTTTACCAAATGGTTCGCTGCAGAAATTCATATCTTCTGCAGACAATAAGGATGTCTTTTTAGGTTGGGAAAGGCTACAAAACATTTCTCTCGGTATAGCTAAGGGAATTGAGTATCTTCACCAAGGGTGTGATAAACGGATTCTCCATTTCGATATATGTTGTGAATTTGACTAA 1317 0.3819 MAIWLKKLIHVFLFCFLIVVVFAETSSSDDQCKESSCDGIHGPFIRFPFRLKGKQPKWCGYNNSWYELYCTDTNQTVLELPFSTKTIVKTINYTSQAIPVSYPEFCLHNQIPNFDISSSPFQFNDDFGLGEYALFNCSGTSHRNTDDSYNIVTSGNFSCLNVPGFEVIAVESWSSIIWTPLLSCTKIQNLVLLPNSLFNNNVDAGLNWFQPNCRNCEQKGGQCKAKRNTSQHKFECIGIIKGSSEGKVIAGGILGPFSLIFVGVTSYCIYVVFIERKNYIRIKKFLKDYKALKPARYSYADIKRITNQFKEELGQGAFGSVFKGKLSSEVQVAVKVLNTSTGNGQEFINEMETMCQIHHVNVARLVGFCADGHRRALVYDFLPNGSLQKFISSADNKDVFLGWERLQNISLGIAKGIEYLHQGCDKRILHFDICCEFD 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04687 438 Pfam Protein tyrosine and serine/threonine kinase 308 435 IPR001245 GO:0004672|GO:0006468
Trre7g04687 438 Gene3D Transferase(Phosphotransferase) domain 1 382 436 - -
Trre7g04687 438 ProSiteProfiles Protein kinase domain profile. 307 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04687 438 SUPERFAMILY Protein kinase-like (PK-like) 292 435 IPR011009 -
Trre7g04687 438 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 433 IPR045874 GO:0004672
Trre7g04687 438 FunFam serine/threonine-protein kinase PBS1-like 276 381 - -
Trre7g04687 438 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Trre7g04687 438 Pfam Wall-associated receptor kinase galacturonan-binding 32 100 IPR025287 GO:0030247
Trre7g04687 438 Gene3D Phosphorylase Kinase; domain 1 273 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04687 Trre-Chr7 54609620 54611322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04687 287 433 Receptor kinase-like Gene Family AT1G66910 51.351 1.85e-44 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre7g04687 PK_Tyr_Ser-Thr 9.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04687 - - tpra:123914140 770