Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04685 ATGACTAAAGGTTTCAAGAATAAGTTGGGTGAAGGAGGCTATGGTTCTGTCTATGAAGGAGAGCTTCGAAGCAAACGCAAAGTAGCTGTTAAGGTATTGACTAAGTCTCAAACCAATGGACAAGACTTCATCAACGAAGTTGCAACAATTGGAAGAATCCGTCATGTCAATGTGGTGCAGCTGATTGGATTTTGTGCCGAAAGAACAAAGCAAGCTCTGATCTACGAGTTCATGCCTAATGGTTCTCTTGATAAACACACATTTTCACAAGAGCAGGGAAACTCATCTTCGTTAAGCTACGATAAAATCTATGACATTTCTCTTGGAATTGCTCGTGGAATTCAATACTTACATCAAGGTTGTGACATGCAAATCATACATTTTGATATAAAACCTCATAACATTCTTCTCGATGAGAACTTTAGCCCGAAGATATCTGATTTTGGTTTGGCAAAGTTATACCGAATAGATCAAAGTATTTTAACATTAACAGCAGCAAGAGGAACAATGGGATACATGGCTCCTGAGTTGTTGTACAAGAACATCGGAAGCATCTCTCACAAAGCTGATGTTTATAGTTTTGGAATGATGCTAATGGAAATGGCAGGTAGAAAAAAGAACATAAATTATATGGAGAATTATTGGCAAGACTACTTTGCTAAATGGATTTATGATCAATTTGAGGAAACAATAGATACAAACAATGGCACTGAGGAGGAAAAGAAAATTGCAATGAAGATGATTGTGATTGCGTTGAAATGCATACAAATGAAACCAGATGATCGTCCTTCAATGAATGAAGTGATAGATATGCTCGAAGGAGATGAAGTGCCTCAACACTTTCCACCTGATCCTCAATCTCTCATAACCTGGCAAAGAATGTCAGCAGATGCAAATGAATTTGATGATAACTAG 915 0.3749 MTKGFKNKLGEGGYGSVYEGELRSKRKVAVKVLTKSQTNGQDFINEVATIGRIRHVNVVQLIGFCAERTKQALIYEFMPNGSLDKHTFSQEQGNSSSLSYDKIYDISLGIARGIQYLHQGCDMQIIHFDIKPHNILLDENFSPKISDFGLAKLYRIDQSILTLTAARGTMGYMAPELLYKNIGSISHKADVYSFGMMLMEMAGRKKNINYMENYWQDYFAKWIYDQFEETIDTNNGTEEEKKIAMKMIVIALKCIQMKPDDRPSMNEVIDMLEGDEVPQHFPPDPQSLITWQRMSADANEFDDN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04685 304 ProSiteProfiles Protein kinase domain profile. 3 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04685 304 SMART serkin_6 3 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04685 304 FunFam serine/threonine-protein kinase PBS1-like 1 77 - -
Trre7g04685 304 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 290 IPR045874 GO:0004672
Trre7g04685 304 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Trre7g04685 304 Gene3D Phosphorylase Kinase; domain 1 4 81 - -
Trre7g04685 304 FunFam PR5-like receptor kinase 78 282 - -
Trre7g04685 304 Gene3D Transferase(Phosphotransferase) domain 1 82 280 - -
Trre7g04685 304 PIRSF ILK 4 281 - -
Trre7g04685 304 SUPERFAMILY Protein kinase-like (PK-like) 6 273 IPR011009 -
Trre7g04685 304 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Trre7g04685 304 Pfam Protein kinase domain 6 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04685 Trre-Chr7 54607234 54608148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04685 1 285 Receptor kinase-like Gene Family AT5G38280 51.361 2.76e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Trre7g04685 Pkinase 6.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04685 - - tpra:123914142 579.711