Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04660 ATGGCTGTGCCGATTCTAACAAAGAAGATCCCAAAGAAAAGGAAAATTGGTGCAGACCAAAGGCCTGTTAATGATTTGGAGTTGCTTATGATGCATAATAGGACTTATTGTGCTGAGATTGCACACAATGTATCTACAAGAAAGAGGAAGGACATAGTTGAGAGAGCTGCACAACTTGATGTTGTTAAATTATCTAGACTAAGAAGCCAAGAGGATGAATAA 222 0.3829 MAVPILTKKIPKKRKIGADQRPVNDLELLMMHNRTYCAEIAHNVSTRKRKDIVERAAQLDVVKLSRLRSQEDE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04660 73 Pfam Ribosomal protein L32 23 61 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trre7g04660 73 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 23 72 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trre7g04660 73 SMART Ribosomal_L32e_2 7 65 IPR001515 GO:0003735|GO:0005840|GO:0006412
Trre7g04660 73 SUPERFAMILY Ribosomal protein L32e 22 62 IPR036351 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04660 Trre-Chr7 54349253 54350846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04660 23 73 Cytoplasmic Ribosomal Protein Gene Family AT5G46430 79.630 5.48e-25 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04660 K02912 - zju:107412873 93.9745