Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04647 ATGGAGCTTATATCTAAAGTTTGCAACCCATTTATTGTGGAGTTTAAAGATTCTTGGGTAGAAAAGGGCTGTTTTGTATGTATTATCATCAGCTATTGTGAAGGAGGAGATATGGCTGAAACTATAAAAAAGGCCAATAGCGTTAACTTTTCTGAAGAGAAACTCTGCAAATGGCTTGTCCAGTTGCTGATGGCACTTGATTACTTACATGTAAATCATATTCTTCATCGTCATGTCAAGTGTTTGAATATATTCTTGACAAAAGAACAAGATATATGTGACTTTGGTCTCGCTAAAATGTTGACATCTAAGGATCTTGCTTCCTCAGATGCTGTGTTTATGAAATGGCTGCTCACAGGCCAGGTTATAAAGCTTTTGTTTCCTCATACACTTACGTGA 399 0.3659 MELISKVCNPFIVEFKDSWVEKGCFVCIIISYCEGGDMAETIKKANSVNFSEEKLCKWLVQLLMALDYLHVNHILHRHVKCLNIFLTKEQDICDFGLAKMLTSKDLASSDAVFMKWLLTGQVIKLLFPHTLT 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04647 132 Gene3D Transferase(Phosphotransferase) domain 1 1 118 - -
Trre7g04647 132 SUPERFAMILY Protein kinase-like (PK-like) 2 105 IPR011009 -
Trre7g04647 132 ProSiteProfiles Protein kinase domain profile. 1 132 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04647 132 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 109 - -
Trre7g04647 132 Pfam Protein kinase domain 2 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04647 Trre-Chr7 54268362 54270819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04647 28 125 MAP Kinase Kinase Kinase AT3G13530 33.000 1.90e-11 58.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Trre7g04647 Pkinase 4.6e-20 CL0016