Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04574 ATGCTCCAAATCTCTTTCTTCTTAATTTCCATCATCACCGCCACCACCACCACCACTACCGTCGTCGCCGATAATGACGACGACTCCGCCGTCATGCTAGACCTTAGAAAATCTCTAAAACCACCTCCATCCGACTGGTCTTCCGATACTCAATTCTGTCAATGGGATCAAAAAATCACGTGCGATTCATCAAATCGCCGCGTAACCTCCATAGACATTTCTTCTCGAAAACTCGCCGGAACCCTACCTTCGAATCTCAACTCTCTCACTCAACTCACATCTCTTAAACTTCAAAACAACTCTTTCTCCGGTCCTCTTCCATCTCTCGCCAACCTCTCCTCTCTCACAACCGCTAATCTCGGCAATAACCAATTCAACTCCGTACCTCCCTCCGCATTTTCCGGCCTAACTTCACTCCAAACTCTCACTCTCAGCAACAATCCTTTCCCTCCATGGACATTCCCTTCGGAGTTAACTCAATCTTCCAATCTCAACTACCTCGATCTTGATTCCGCAAATATCAACGGAACGTTACCGGACATTTTCAACAATTTCGCTGCTCTCACCACCCTTCGACTCGCCTATAACAATCTCACCGGAGAATTACCTAACTCTCTCGCTACTTCCTCAATCCAAAATTTATGGCTCAATAACAACAACGTCGGTTTAACCGGTTCAATCGCCGTGATTGCCAATATGACGCAGTTATCTCACGCATGGCTTCATGTTAATCAGTTCACAGGTCCAATTCCAGATTTATCGCAATGTACGAATTTGGTTGATTTGCAACTTAGGGATAATCAGTTAACTGGTTTGGTTCCTGATTCTCTGATGAGTATGTCTAGCTTGCAGAAAGTTTCTCTTCGAAATAATAATCTTCAGGGACCTTTTCCAGTTTTTAAAGGTGAAAATATGACAGTTGAAGATGATGGGAGAAATAATTTTTGTCTTGGTAATAAACCAGGACCTTGTAATGATATGGTTATGGTTTTGCTTCACATTGCTGAGGGATTTGGGTATCCTCTTAAATTGGCGCTGGAGATGAAAGAGAATGATCCTTGTCAAGGTTGGTGGTTTGTTACATGTGATAACGATAAGAATATTATTTCGGTGATTTTAGCAAAGCAGAATTTACAGGGAACAATTTCGCCTGCTTTTGCCAATTTGAAAAAATTGAAGAGATTGAATCTATCTGGGAATAATTTGACTGGTTCTATACCTCAGAGTTTGACTACATTGTCTCAACTTGAGAGTCTTGATGTCTCTAACAATAACCTATCAGGAGAGGTTCCCAAATTCTCACCGAAGGTGGCGTTAGTAACTGGTGGTAATGTTTGGATTGGTAAAAATATTGGGTCTGGTCTTGATGGAAGGGCTCATGGATCGGGAAAGGGTAATTCGATGACGCCAGGTTCGATTGCTGGGATAGTGATTATTGTTGTGCTTTTTGTTGTTGCTGTGTTGTTTGTTTCTTGGAGGTGTTATTCTAGAAAGCGGCTTCGGAAATTTGCAAGGGTTGGTAATCCTGAAAATGGGGAAGGGAATGTTAAGCTTGGTCTTGCGAGTGTTTCAAACGGATATGGTGGTGTTCCGAGCGAGTTGCAAAGCCAGAGCAGTGGTGATCATAGTCAGCTTCACGGTTTTGATAAGGGGAGTGATGTAAATCCTACGATTTCGATTCATATTCTTCGACAAGTGACAAATGATTTCAGCGACGATAACATTTTGGGAAGGGGAGGATTTGGTATTGTTTATAAAGGGGAGTTACCTGATGGAACTAAAATTGCTGTCAAGAGGATGATATCCGTTGCATCGGGAAGCAAAGGGTTGAATGAGTTCGAAGCAGAGATTGCTGTTCTTACCAAGGTTAGGCATAGACATCTGGTTGCTCTTATGGGATATTGCATCAATGGAAATGAGAGGCTTTTGGTATATGAGCATATGCCTCAAGGGACATTAACACAACATCTGTTTGAATGCCGTGAACATGGGTATACTCCTTTGACATGGAAACAAAGGTTGGTAATAGCTTTGGATGTTGGACGGGGGATGGAATACTTGCACAGCTTAGCTCGGCAAAGCTTCATTCATAGAGACTTAAAACCATCAAATATACTATTAGGCAATGACATGAGAGCAAAGGTTGCAGATTTTGGATTGGTTAAAAATGCACCAGACGGGAAGCATTCTATTGAGACAAAGTTGGCTGGAACATTTGGATATCTTGCACCCGAGTATGCAGCTACTGGAAGAGTGACAACCAAAGTGGATGTTTATGCATTTGGAGTAGTTTTGATGGAACTGATCACAGGTAGAAAGGCATTAGATGATACTGTGCCTGGTGAAAGGTCTCATTTGGTTACTTGGTTCCGTAGGGTACTGATTAACAAACAAGACATTCCAAAGGCAATTGATCAAACTCTCGACCCAGATGAAGAAACAATGTTGAGCATATATAAAGTGGCTGAGCTCGCTGGCCATTGCACCGCTCGTGAACCATACCAAAGGCCAGATATGGGGCATGCCGTGAATGTGTTGGGTCCCCTTGTGCAGCTATGGAAACCTACTGCCCAAACAGACGAAGGAAATTATGGCGTTGACAATCAGATGAATCTTGCTGAAGCACTACAAAGGTGGCAAGCCCATGAAGGCACTTCATCGATATTTAGTGACATGTCCTACTCACAAACCCAAGCAAGTTCTAAACCTCCATTATTTGCACCTTCCTTTGATTCACCGGATTGCCGGTAG 2751 0.4282 MLQISFFLISIITATTTTTTVVADNDDDSAVMLDLRKSLKPPPSDWSSDTQFCQWDQKITCDSSNRRVTSIDISSRKLAGTLPSNLNSLTQLTSLKLQNNSFSGPLPSLANLSSLTTANLGNNQFNSVPPSAFSGLTSLQTLTLSNNPFPPWTFPSELTQSSNLNYLDLDSANINGTLPDIFNNFAALTTLRLAYNNLTGELPNSLATSSIQNLWLNNNNVGLTGSIAVIANMTQLSHAWLHVNQFTGPIPDLSQCTNLVDLQLRDNQLTGLVPDSLMSMSSLQKVSLRNNNLQGPFPVFKGENMTVEDDGRNNFCLGNKPGPCNDMVMVLLHIAEGFGYPLKLALEMKENDPCQGWWFVTCDNDKNIISVILAKQNLQGTISPAFANLKKLKRLNLSGNNLTGSIPQSLTTLSQLESLDVSNNNLSGEVPKFSPKVALVTGGNVWIGKNIGSGLDGRAHGSGKGNSMTPGSIAGIVIIVVLFVVAVLFVSWRCYSRKRLRKFARVGNPENGEGNVKLGLASVSNGYGGVPSELQSQSSGDHSQLHGFDKGSDVNPTISIHILRQVTNDFSDDNILGRGGFGIVYKGELPDGTKIAVKRMISVASGSKGLNEFEAEIAVLTKVRHRHLVALMGYCINGNERLLVYEHMPQGTLTQHLFECREHGYTPLTWKQRLVIALDVGRGMEYLHSLARQSFIHRDLKPSNILLGNDMRAKVADFGLVKNAPDGKHSIETKLAGTFGYLAPEYAATGRVTTKVDVYAFGVVLMELITGRKALDDTVPGERSHLVTWFRRVLINKQDIPKAIDQTLDPDEETMLSIYKVAELAGHCTAREPYQRPDMGHAVNVLGPLVQLWKPTAQTDEGNYGVDNQMNLAEALQRWQAHEGTSSIFSDMSYSQTQASSKPPLFAPSFDSPDCR 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04574 916 SUPERFAMILY Protein kinase-like (PK-like) 558 860 IPR011009 -
Trre7g04574 916 Gene3D Transferase(Phosphotransferase) domain 1 648 869 - -
Trre7g04574 916 SMART serkin_6 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04574 916 FunFam receptor-like protein kinase FERONIA 534 647 - -
Trre7g04574 916 ProSitePatterns Serine/Threonine protein kinases active-site signature. 695 707 IPR008271 GO:0004672|GO:0006468
Trre7g04574 916 SUPERFAMILY L domain-like 39 436 - -
Trre7g04574 916 Gene3D Ribonuclease Inhibitor 327 450 IPR032675 -
Trre7g04574 916 Gene3D Phosphorylase Kinase; domain 1 533 647 - -
Trre7g04574 916 ProSiteProfiles Protein kinase domain profile. 570 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04574 916 FunFam Receptor-like kinase TMK4 26 322 - -
Trre7g04574 916 Pfam Protein tyrosine and serine/threonine kinase 574 844 IPR001245 GO:0004672|GO:0006468
Trre7g04574 916 Pfam Leucine rich repeat 370 426 IPR001611 GO:0005515
Trre7g04574 916 Pfam Leucine rich repeat 110 148 IPR001611 GO:0005515
Trre7g04574 916 ProSiteProfiles Leucine-rich repeat profile. 391 414 IPR001611 GO:0005515
Trre7g04574 916 PANTHER OSJNBA0070M12.3 PROTEIN 10 916 - -
Trre7g04574 916 FunFam Leucine-rich repeat receptor-like kinase 326 450 - -
Trre7g04574 916 FunFam receptor protein kinase TMK1 648 865 - -
Trre7g04574 916 Gene3D Ribonuclease Inhibitor 24 321 IPR032675 -
Trre7g04574 916 CDD STKc_IRAK 576 849 - -
Trre7g04574 916 ProSitePatterns Protein kinases ATP-binding region signature. 576 598 IPR017441 GO:0005524
Trre7g04574 916 SMART LRR_typ_2 136 161 IPR003591 -
Trre7g04574 916 SMART LRR_typ_2 413 435 IPR003591 -
Trre7g04574 916 SMART LRR_typ_2 185 209 IPR003591 -
Trre7g04574 916 SMART LRR_typ_2 256 279 IPR003591 -
Trre7g04574 916 SMART LRR_typ_2 112 135 IPR003591 -
Trre7g04574 916 SMART LRR_typ_2 389 412 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04574 Trre-Chr7 53665398 53668859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04574 68 846 Receptor kinase-like Gene Family AT5G07280 31.746 4.65e-95 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Trre7g04574 PK_Tyr_Ser-Thr 4.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04574 - - gmx:100286794 1141.72