Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre7g04561 | ATGGATGAGGATTTCGATTTGCCAACAGAAAGTGAAATGGAAATGCCTGAGGAAGAAGAAGAGATGATGAGTCCGATCCAGAAGGTCGGTGAGGAGAAAGAGATTGGTAACAATGGTTTGAAGAAGAAACTTGTTAAGGAAGGTGAAGGATGGGAAACTCCTGATATTGGAGATCAAGTTGAAGTGCATTATACTGGAACTTTGCTTGATGGAACCAAATTTGATTCGAGCCGTGATAGGGCCACCACTTTCAAGTTTAAGCTTGGTCAAGGGCAAGTGATCAAAGGATGGGATGAAGGTATCAAAACCATGAAGAAGGGTGAAAATGCTATTTTCACAATACCTCCAGAATTGGCTTATGGAGAGTCTGGGTCACCTCCCACTATTCCACCAAATGCAACTCTTCAGTTTGATGTGGAGTTGCTGTCTTGGACTAGTGTTAAGGACATTACCAAGGATGGTGGGATATTGAAGAATGTTGTAACTAAAGGGGAGAAATGGGACAATCCTAAGGATCTTGATGAAGTATTTGTTAAGTATGAAGCTCGTCTTGAAGATGGGACGATTATTTCAAAATCTGATGGGGTCGAGTTCACTGTTGAAGAGGGTTATTTTTGTCCTGCTTTAGCTAAGGCTGTGAAAACAATGAAGAAGGGAGAGAAAGTTCTCTTGAATGTTAAGCCAGAATATGCATTTGGTGAGAGTGGAAAACCTTCATCAGGAAATGATGGTGCGGTACCACCAAATGCTTCGCTCCAAATCGAGCTTGAGTTAGTCTCGTGGAAGACTGTATCTGACATTACTAAGGATAGGAAGGTCCTTAAGAAGATCTTGAATGAAGGAGAGGGATACGAACGACCAAATGATGGAGCTGTGGTTCAAGTGAAACTTATCGGAAAGCTGCAAGATGGGACTGTCTTCCTTAAGAAGGGTCACGATGACGATCAGCCATTTGAGTTCAGAATTGATGAAGAGCAAGTAATTGATGGACTTGATAGAGCTGTGAAGAACATGAAGAAAGGGGAAATTGCATTGGTGATCATACAGCCTGAGTATGCTTTTGGTCAATCTGCCTCCCCTCAGGAATTGGCTACTGTTCCTCCTAATTCCACCGTTTATTATGCAGTTGAGCTGATTTCCTTTGTAAAGGAAAAGGAATCATGGGATCTGAATACAGAAGAGAAGATAGAAGCAGCTGGAAAGAAAAAGGAAGAAGGGAATGCATTGTTCAAAGCTGGTAAACACGAAAGAGCATCAAAGAGATATGAGAAGGCCATAAAGTATATCGAGTACGATTCCGCCTTTGGTGATATGGAGAAACAGCAGGCCAAAGCATTGAAAATTACATGCAATCTTAACGACGCAGCCTGTAAGTTGAAACTCAAGGACTACAAACAGGCAGAGAAGTTGTGCACAAAGGTATTAGAGCTTGATAGTAGGAATGTAAAAGCACTATACCGGAGGGCACAAGCATATATTCATCTTGTTGACTTGGATTTGGCTGAAATGGATATCAAGAAAGCCCTTGAAATTGATCCAGATAACAGGGATGTGAAAATTGAGTACAAAATTTTGAAGGACAAAGTTAGAGAATACAACAAGAAGGATGCACAATTCTATGGTAACATATTTGCCAAAATGAATAAAGTAGATCAATCAAGAACTGCAGCAGCAAAGCAGGAATCTGTGCCCATGGCTGTGGATAGTAAAGCTTAA | 1716 | 0.4108 | MDEDFDLPTESEMEMPEEEEEMMSPIQKVGEEKEIGNNGLKKKLVKEGEGWETPDIGDQVEVHYTGTLLDGTKFDSSRDRATTFKFKLGQGQVIKGWDEGIKTMKKGENAIFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVKDITKDGGILKNVVTKGEKWDNPKDLDEVFVKYEARLEDGTIISKSDGVEFTVEEGYFCPALAKAVKTMKKGEKVLLNVKPEYAFGESGKPSSGNDGAVPPNASLQIELELVSWKTVSDITKDRKVLKKILNEGEGYERPNDGAVVQVKLIGKLQDGTVFLKKGHDDDQPFEFRIDEEQVIDGLDRAVKNMKKGEIALVIIQPEYAFGQSASPQELATVPPNSTVYYAVELISFVKEKESWDLNTEEKIEAAGKKKEEGNALFKAGKHERASKRYEKAIKYIEYDSAFGDMEKQQAKALKITCNLNDAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYIHLVDLDLAEMDIKKALEIDPDNRDVKIEYKILKDKVREYNKKDAQFYGNIFAKMNKVDQSRTAAAKQESVPMAVDSKA | 571 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre7g04561 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 173 | 262 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | Coils | Coil | 515 | 535 | - | - | |
Trre7g04561 | 571 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Trre7g04561 | 571 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 153 | 265 | - | - | |
Trre7g04561 | 571 | Gene3D | - | 6 | 146 | IPR046357 | GO:0003755 | |
Trre7g04561 | 571 | MobiDBLite | consensus disorder prediction | 21 | 35 | - | - | |
Trre7g04561 | 571 | FunFam | Peptidylprolyl isomerase | 387 | 542 | - | - | |
Trre7g04561 | 571 | SUPERFAMILY | FKBP-like | 147 | 265 | - | - | |
Trre7g04561 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 290 | 382 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | FunFam | Peptidylprolyl isomerase | 30 | 148 | - | - | |
Trre7g04561 | 571 | SMART | tpr_5 | 482 | 515 | IPR019734 | GO:0005515 | |
Trre7g04561 | 571 | SMART | tpr_5 | 399 | 432 | IPR019734 | GO:0005515 | |
Trre7g04561 | 571 | SMART | tpr_5 | 448 | 481 | IPR019734 | GO:0005515 | |
Trre7g04561 | 571 | Gene3D | Tetratricopeptide repeat domain | 385 | 542 | IPR011990 | GO:0005515 | |
Trre7g04561 | 571 | Pfam | Tetratricopeptide repeat | 459 | 515 | - | - | |
Trre7g04561 | 571 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 57 | 145 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | Gene3D | - | 147 | 262 | IPR046357 | GO:0003755 | |
Trre7g04561 | 571 | FunFam | Peptidylprolyl isomerase | 149 | 262 | - | - | |
Trre7g04561 | 571 | FunFam | Peptidylprolyl isomerase | 263 | 384 | - | - | |
Trre7g04561 | 571 | SUPERFAMILY | FKBP-like | 265 | 399 | - | - | |
Trre7g04561 | 571 | Gene3D | - | 263 | 384 | IPR046357 | GO:0003755 | |
Trre7g04561 | 571 | SUPERFAMILY | TPR-like | 388 | 548 | IPR011990 | GO:0005515 | |
Trre7g04561 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 52 | 142 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 170 | 259 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 284 | 379 | IPR001179 | GO:0003755 | |
Trre7g04561 | 571 | ProSiteProfiles | TPR repeat profile. | 482 | 515 | IPR019734 | GO:0005515 | |
Trre7g04561 | 571 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Trre7g04561 | 571 | SUPERFAMILY | FKBP-like | 33 | 149 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre7g04561 | Trre-Chr7 | 53576026 | 53579004 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre7g04561 | 1 | 571 | Calmodulin-binding Proteins | AT5G48570 | 70.962 | 0.0 | 845 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre7g04561 | K09571 | - | gmx:100810243 | 979.548 |