Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04547 ATGCTCAAAACGCTAGAGAGGTATCAGAAATGCAACTATGGTGCACCTGAGACTAATGTGTCTACACGAGAAGCCTTGGAGTTAAGCAGTCAACAGGAATATTTGAAGCTGAAAGCTCGTTATGAAGCATTACAACGGTCTCAGAGGAACCTTATGGGAGAAGATCTTGGTCCTCTGAGCAGTAAAGAGCTAGAGACACTTGAAAGGCAGCTAGATTCATCCTTGAAGCAAATAAGATCAACAAGGACCCAATTTATGCTGGATCAGCTCACTGATCTTCAACGCAAGGAACATATGCTAAGTGAGGCTAACAGGTCCCTCAGACAAAGGCAGTTGGAAGGGTATCAATTAAATCAACTCCAAATGAATGCTTGTGTTGAAGAAATGGGCTATGGTAGGCCTCCAAGTCAAACTCAGGGTGATGGCCTCTATCAACAACTGGACTGTGAGCCAACATTACAAATTGGCTATCAGGCTGATCCAGGGTCAGTGGTTACGGCAGGCCCAAGCATGAGTAATTACATGGGGGGATGGTTACCATAG 543 0.4494 MLKTLERYQKCNYGAPETNVSTREALELSSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELETLERQLDSSLKQIRSTRTQFMLDQLTDLQRKEHMLSEANRSLRQRQLEGYQLNQLQMNACVEEMGYGRPPSQTQGDGLYQQLDCEPTLQIGYQADPGSVVTAGPSMSNYMGGWLP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04547 180 Pfam K-box region 29 110 IPR002487 GO:0003700|GO:0005634|GO:0006355
Trre7g04547 180 Coils Coil 64 84 - -
Trre7g04547 180 ProSiteProfiles K-box domain profile. 27 123 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04547 Trre-Chr7 53456260 53458922 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04547 1 180 MADS-box Gene Family AT1G24260 62.703 1.39e-65 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04547 - - gmx:100805078 323.168