Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04504 ATGGCTGCTGGTAGACATGGAGGTTACCACGAAAACGAGATTAAGGATCATGAGTCCAATTTGGAAGTTACTAGGCGCGGGTTTTCAAATTCAAAAGAGTATGATCCGGTTAGGAATGGTGGTCATGATGGTGTGAGGAGTGGGGGGAGAGATTCGAGGGATAGGATTAGGACGAGGCAGAGAGATGCTAGGGAGAGAGATGCTGTTACTAATGGAAGTTATCGGTCATCTTCCAGCCGGAGTGATTCTGGCAGTAGTGGCAGCCTTGGACCTCGTCGGTGTGATTTTCCTGTGAAGGCAGTTGATAGAGAGCCTGGTGAGCTTTCCAGTGAGAGTGGGTCTGATGGTGCTGTTGAATCTGAATCTGTGGTGAAGGATTGTGAGATTGCAATGTTTGAAGGAAACAAGTCTCGCTCCCCTGCACCACAGGAGAGGAAAAGGAAATTTTCACCCATAGTGTGGGATCAGGATGACAAGGAAGTGAAGGGATCATCAAAGGTTAGGGTCTCGACAACATCGGTGGCTGCTCTTCCTCCTCTGCCCCAGCTTTCAAAACCGTCTATTCAGTCACCGGCTGTTTCTTATGGTGAGGTTCAAGCACGTTCTGTTAGGAACAGAGAAACCAGGGATCTTGAGTTGCCCACAGTAGCTAAGGTTATGGTTCCCTCTCCTTCTGGATTGCAGTCCTTGTCACCGAAACAGACTTGGGGTAGTGATCAGGAAGCTGAGCAGCCAGAAGGGGAAGATTATGTTCCAACTCGTAATATATCATCTTCACGATGGGCAGCTGGAGATAACTCTCCTGTTGATGAGGGTGAAATTCTCAATGATGAGGAAATGCCCAGAAGGAAGAAGAGGCAAACTCCCGAGCTCTTGGAGACTAGAGTGAGGAACAAGTTATTGGGCCCCGATGAGTCTAAAATAGGTGGTTTTGAAGGAGCTAGAGCCAGATCATCTGATTCGGAAGAAAGAAGTGTTATCCATGGGAGAACATCCAGTGGCGATGGACATCCTGGTATTGAATCAGAAAAGGATGACTATATGGACGTTGATGTTCGAGGTATGAAAAGTGACACCAGCAATAGTCACTCAGATACGGAATCTGAAGATTACGAGGATAGGCCGGAGACTCCAGAACCACCAGCTCAACCTCAAAGGACGGTCAACATGCTTCAGGGTTGTAGAAGTGTTGATGAGTTTGAGAGACTTAACAAGATAGATGAAGGAACGTACGGTGTTGTATATAGGGCAAAAGATAAGAAGACCGGGGAAATTGTAGCATTAAAGAAGGTCAAGATGGAGAAGGAAAAAGAAGGCTTCCCACTGACTTCTCTTAGGGAAATAAACATTCTTCTTTCTTTTCACCATCCATACATAGTTGATGTCAAGGAAGTAGTGGTTGGAAGTAGCCTTGATAGTATTTTCATGGTTATGGAATACATGGAACATGATCTTAAAGGATTAATGGAGTCAATGAAGCAACCATTTAGCCAAAGTGAAGTGAAGTGCTTAATGATCCAGCTTTTAGAAGGCGTGAAGTATCTTCATGACAACTGGGTGCTTCATAGGGATTTGAAGACTTCAAACCTGCTTTTAAATAACAGGGGTGAGCTAAAAATTTGTGATTTTGGGTTGGCTCGTCAATATGGGAGTCCTTTGAAACCATATACTCACCTGGTGGTTACTCTTTGGTACAGGGCACCTGAACTTCTTCTGGGGGCAAAACAGTATTCAACAGCTATTGATATGTGGTCTCTTGGTTGTATAATGGCTGAGCTATTGTCTAAGGAACCGCTGTTCAATGGAAAAACGGAATTTGATCAACTTGACAAGATTTTCAGGATACTTGGGACACCAAATGAAACAATTTGGCCGGGCTTCTCAAAATTACCCGGAGTCAAGGTCAATTTTGTCAAGCACCAGTATAATCTTCTGCGTAAAAAGTTTCCCGCCACATCATTCACTGGATCTCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAAGCTTCTAACTTATGACCCTGAAAAGCGGATAACGGCTGAAGCTGCTCTCAATCATGAATGGTTCCGTGAAGTTCCTCTTCCCAAGAGCAAAGAATTCATGCCTACATTTCCTGCCCAGCATGCTCAGGACAGGCGGATGCGGAGAGTGTACAAGAGTCCAGACCCTTTAGAGGAGCAGCGACGGAAAGAGTTGCAGCAGGGTGAATTGGGGACTGGCGGAATATTTGGTTAA 2241 0.4507 MAAGRHGGYHENEIKDHESNLEVTRRGFSNSKEYDPVRNGGHDGVRSGGRDSRDRIRTRQRDARERDAVTNGSYRSSSSRSDSGSSGSLGPRRCDFPVKAVDREPGELSSESGSDGAVESESVVKDCEIAMFEGNKSRSPAPQERKRKFSPIVWDQDDKEVKGSSKVRVSTTSVAALPPLPQLSKPSIQSPAVSYGEVQARSVRNRETRDLELPTVAKVMVPSPSGLQSLSPKQTWGSDQEAEQPEGEDYVPTRNISSSRWAAGDNSPVDEGEILNDEEMPRRKKRQTPELLETRVRNKLLGPDESKIGGFEGARARSSDSEERSVIHGRTSSGDGHPGIESEKDDYMDVDVRGMKSDTSNSHSDTESEDYEDRPETPEPPAQPQRTVNMLQGCRSVDEFERLNKIDEGTYGVVYRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPYIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMESMKQPFSQSEVKCLMIQLLEGVKYLHDNWVLHRDLKTSNLLLNNRGELKICDFGLARQYGSPLKPYTHLVVTLWYRAPELLLGAKQYSTAIDMWSLGCIMAELLSKEPLFNGKTEFDQLDKIFRILGTPNETIWPGFSKLPGVKVNFVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNKLLTYDPEKRITAEAALNHEWFREVPLPKSKEFMPTFPAQHAQDRRMRRVYKSPDPLEEQRRKELQQGELGTGGIFG 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04504 746 MobiDBLite consensus disorder prediction 222 241 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 337 379 - -
Trre7g04504 746 Gene3D Transferase(Phosphotransferase) domain 1 483 724 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 721 746 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 70 88 - -
Trre7g04504 746 FunFam Cyclin-dependent kinase G-2 483 722 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 721 735 - -
Trre7g04504 746 Gene3D Phosphorylase Kinase; domain 1 384 482 - -
Trre7g04504 746 SMART serkin_6 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04504 746 MobiDBLite consensus disorder prediction 316 330 - -
Trre7g04504 746 CDD STKc_CDC2L1 394 691 IPR045267 GO:0004674|GO:0005524|GO:0006468
Trre7g04504 746 Pfam Protein kinase domain 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04504 746 SUPERFAMILY Protein kinase-like (PK-like) 392 697 IPR011009 -
Trre7g04504 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 520 532 IPR008271 GO:0004672|GO:0006468
Trre7g04504 746 ProSiteProfiles Protein kinase domain profile. 400 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04504 746 MobiDBLite consensus disorder prediction 275 302 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 1 386 - -
Trre7g04504 746 PANTHER CELL DIVISION PROTEIN KINASE 398 697 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 8 69 - -
Trre7g04504 746 FunFam cyclin-dependent kinase G-2 isoform X1 385 482 - -
Trre7g04504 746 MobiDBLite consensus disorder prediction 139 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04504 Trre-Chr7 53022099 53025314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04504 391 739 Core Cell Cycle Gene Families AT5G10270 45.479 4.81e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Trre7g04504 Pkinase 9.1e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04504 K08818 - gmx:100792524 1169.07