Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04489 ATGGATTGGAATGAAAATATTTTAGTCATTCAGATAAATTGTTTTGCATGCGGAGGACTCGTAATAAGTGTTTGTGCTTGTCATAAAATTATAGATGCTGCAACTGCTTTCAATTTTATGAACGATTGGGCCAAACTGAACCGTGAAGAAGGAGATTCATATTCAAAGTTATTTTTACCCTACGATTTACTTTATGCGGGAAATACAATATTTCCACAAGGTAATTTTCCAAAATTTCCCGAACGTGAGTTTGTGATAGACAAAACAATAGTGTGCAAAAGATTTGTGTTCGAAGCTTCTAAGATACAGTTACTTAAGAATATGGTAAATTATGATTCCGGTGTGGTGAAAAATCCCACGTGTGTAGAAGTTGTAACGTCACTGATTTACAAGTGTGTGGTTAATTCATTGGGATTAAATTACAAAACAACATCGCTCCGCATGGCTGTAGATCTTCGCAAAAGAATGGTTCCTCTGTTATCTCAAAAATGTGTAGGAAATTTGATTTGGTTCTTAGTTGTTATAAACCCGGAATTACATGACTTGATATTCAAAATTAGGCAAGGATTGTGCGAGTTTCGCGAGGTTTATCCAAAGAAATTTGGAGGGGAAGAAAAAGACTTGTCATTTATTTTTGAATGTTTAAAACAAGATACTTCTTTAGTTACAAAGATTAATGATGATCATAGTTGGATTCTTTATTCTAGTTGGTGTAGATTTTCAATGTATGAAGTTGATTTTGGATGGGGGAAACCAATATGGGTGACAACTAGTACTTGTCCTGTGAAAAATGTGATAGTTTTGATGGATACAAGAGATGGAGATGGGATTGAAGCAATTGTGAATATGAATAAGAATGATATGATTATGTTTGAACATGATGTGGAGCTCCTTCAATATGCCTCTCCAAATCCTAGTATTCTTGAACATGATGATGTAGCTAATGGTTTCTAA 954 0.3417 MDWNENILVIQINCFACGGLVISVCACHKIIDAATAFNFMNDWAKLNREEGDSYSKLFLPYDLLYAGNTIFPQGNFPKFPEREFVIDKTIVCKRFVFEASKIQLLKNMVNYDSGVVKNPTCVEVVTSLIYKCVVNSLGLNYKTTSLRMAVDLRKRMVPLLSQKCVGNLIWFLVVINPELHDLIFKIRQGLCEFREVYPKKFGGEEKDLSFIFECLKQDTSLVTKINDDHSWILYSSWCRFSMYEVDFGWGKPIWVTTSTCPVKNVIVLMDTRDGDGIEAIVNMNKNDMIMFEHDVELLQYASPNPSILEHDDVANGF 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04489 317 PANTHER F21J9.9 8 302 - -
Trre7g04489 317 Gene3D - 87 301 IPR023213 -
Trre7g04489 317 Pfam Transferase family 6 297 - -
Trre7g04489 317 Gene3D - 2 71 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04489 Trre-Chr7 52861142 52862095 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04489 7 292 Monolignol Biosynthesis Gene Families AT5G48930 21.905 1.06e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04489 - - lja:Lj3g3v0730030.1 380.563