Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04486 ATGGAAATTGAAATAATATCAAGAGAATTCATCAAACCCTCATCACCTACTCCTCCTAATCTCAAAAAATTTCCCATCTCTTTTTTAGATCACATTACTTTCCGTAGGTTCAAAGATCAACTTTCCATTGAGTGTAACGATCAAGGTGTGTCATTTCTAGTCGCAAATATCATAGGAATAAAATTATCGACAATCCTCCAAAACCCATCTGGAAATGTGCTTAACCCTTTGTTTCCCGATGAATCACAATGGAAGAAAATGGATTGGGATGAAAGTATTTTAGTCATTCAGATAAATTGTTTTGAATGCGGAGGATTCGTAATAAGTGTTTGTGCATGTCACAAAATTGTAGATGCTGCAACCGCTTTCAATTTTATGAACGATTGGGCAAAAGTGAACTGTGAAGAAGATGATTCAAATTCAAAATTATCATTGCCCTACAATTTACTTTACGCGGGAGATACCATATTTCCTCAAGGAGATTTGCCAAATTTTCCGGAAGGTGAGTTTGAAATAGACAAAACAATAGTGTGCAAAAGATTTGTGTTTGAAGCTTCTAAGATAAAATTACTTAAGAACATGGTAAATTACGATTTCCATGTGGTGGAAAATCCCACACGTGTAGAAGTTGTCACGTCACTGATTTACAAGTGTGTGGTTTCTACATTAGGATTAAATTACAAAACAACATCGCTTCGCATGGCGGTAGATCTTCGCAAAAGAATGGTTCCTCCATTGTCTGAAAAGTGTGTAGGAAACTTAGCTTGGTTCTTATTTGTTATGAACCCGGAATTACATGACTTGGTATTTAAAATTAGGCAAGGGTTGTGTGAGTTTCGCGAAGTTTATCCTAAGAAATTTGGAGGGAAAGAAAAAGACTCGCTATTTATTTTTGAATGTTTGAAACAAGTTACTACTTCAGATTCAGAGAATAATTTTGATGATCAAAATTTGATTCTTTATGCTAGTTGGTGTAAGTTTCCAATGTATGAAGCTGATTTTGGATGGGGGAAACCAATATGGGTGACAACTAGTACTTGTCCTGTGAAAAATGCGATAATTTTGATGGATACAAGAGATGGAGATGGAATTGAAGCAATTGTGAATATGAAAGAAAATGATATGATTATGTTTGAACATAATGTGGAACTTCTTCAATATGCCTCTTTGAATCCTAGTATTCTTGAACATGATGTAGCTAATGGTTTCTAA 1212 0.3474 MEIEIISREFIKPSSPTPPNLKKFPISFLDHITFRRFKDQLSIECNDQGVSFLVANIIGIKLSTILQNPSGNVLNPLFPDESQWKKMDWDESILVIQINCFECGGFVISVCACHKIVDAATAFNFMNDWAKVNCEEDDSNSKLSLPYNLLYAGDTIFPQGDLPNFPEGEFEIDKTIVCKRFVFEASKIKLLKNMVNYDFHVVENPTRVEVVTSLIYKCVVSTLGLNYKTTSLRMAVDLRKRMVPPLSEKCVGNLAWFLFVMNPELHDLVFKIRQGLCEFREVYPKKFGGKEKDSLFIFECLKQVTTSDSENNFDDQNLILYASWCKFPMYEADFGWGKPIWVTTSTCPVKNAIILMDTRDGDGIEAIVNMKENDMIMFEHNVELLQYASLNPSILEHDVANGF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04486 403 Pfam Transferase family 38 384 - -
Trre7g04486 403 Gene3D - 1 35 IPR023213 -
Trre7g04486 403 Gene3D - 36 150 IPR023213 -
Trre7g04486 403 Gene3D - 173 389 IPR023213 -
Trre7g04486 403 PANTHER F21J9.9 36 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04486 Trre-Chr7 52824693 52826019 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04486 40 379 Monolignol Biosynthesis Gene Families AT5G48930 22.513 1.11e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04486 - - gmx:100806928 441.039