Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04484 ATGGAAATGGAATTAGTTTCTAGAGAAACCATCAAACCATCATCACCAACTCCTTCTCACCTTAGAATATATCCACTTTCATTTTTAGACAACATTGCTGTCCGTAAGTATATACCATTGCTTTACTTTTACAACCAAACCAAAGATAATGACCAAAATTTCAAAATTTCACAACTTCGAAAATCTTTATCTCAACTTCTATCTAAATACTACCCTTTTGCTGGAAGATTGGAAGATAAAATAACCATTGAATGTAATGATCATGGTGTGTCATTTTTAGTAACAAAAATAAAAAACCAACTATCAGAGATTCTCTAA 318 0.3082 MEMELVSRETIKPSSPTPSHLRIYPLSFLDNIAVRKYIPLLYFYNQTKDNDQNFKISQLRKSLSQLLSKYYPFAGRLEDKITIECNDHGVSFLVTKIKNQLSEIL 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04484 105 Gene3D - 1 105 IPR023213 -
Trre7g04484 105 PANTHER F21J9.9 4 105 - -
Trre7g04484 105 Pfam Transferase family 2 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04484 Trre-Chr7 52819991 52820308 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04484 1 94 Monolignol Biosynthesis Gene Families AT5G48930 32.000 1.21e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04484 - K13065 gmx:100806928 133.265