Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04477 ATGTTGACAAAAGAAAATTTTAATGCATCGGCAGGTTCTGCGCCAAAGGCTCGTTACTCGTTAGAACCAAATAAAGTGAAAGGAAAGATTGTATACTGTAAATTTAGAACATGGAGCACTGAAGCTATTGTGAAAGCAATAGGAGGCATTGATGTTCCTGAAACATTCATGGCACCTGTTACATTTGTGAATAGAAGCACAGGTCAAATTATTACAAATTATATACAATCTACAAGATCGCCATCAGCGGTGATACATAAAAGCCATGAGGTGAAAATACCAGCTCCATTTGTTGCTTCTTTTTCATCTAGGGGTCCAAATTTAGGATCTCAGCATGTTCTCAAGCCTGATATAACAGCTCCAGGCATTAGCATTTTGGCAGCATATACACTTAGGCAATCAATTGCTAGTCCTGGATCAACTATGTATAATGCTACCATTAGATCTCCAAAAGGAGTGGAAATTACAGTGAAACCTACTAGCCTTATTTTCTCTTATACAATGCAGAAGAAGAGCTTTAAGGTGGTGGTGAAAGCAAAGTCTATGATAAACATGAAAATTTTATCAGGTTCACTTATATGGAGAAGTCGTCGTTACATTGTTAGAAGTCCTATTGTAATCTATAATCCATACTATTAG 639 0.3678 MLTKENFNASAGSAPKARYSLEPNKVKGKIVYCKFRTWSTEAIVKAIGGIDVPETFMAPVTFVNRSTGQIITNYIQSTRSPSAVIHKSHEVKIPAPFVASFSSRGPNLGSQHVLKPDITAPGISILAAYTLRQSIASPGSTMYNATIRSPKGVEITVKPTSLIFSYTMQKKSFKVVVKAKSMINMKILSGSLIWRSRRYIVRSPIVIYNPYY 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04477 212 Gene3D - 2 92 - -
Trre7g04477 212 CDD PA_subtilisin_like 18 85 - -
Trre7g04477 212 Pfam Subtilase family 67 141 IPR000209 GO:0006508|GO:0008236
Trre7g04477 212 Gene3D - 128 210 - -
Trre7g04477 212 Pfam Fibronectin type-III domain 139 207 IPR041469 -
Trre7g04477 212 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 134 IPR045051 -
Trre7g04477 212 SUPERFAMILY Subtilisin-like 44 131 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04477 Trre-Chr7 52737085 52738466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04477 17 144 Subtilisin-like Serine Gene Family AT4G00230 51.748 1.59e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04477 - - ccaj:109800351 171.785