Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04447 ATGGAGGAGGAGGATGAGATTCAAGCACAACATAAATTCCCTAGAGTTGGAAATGAAGATGATAATGGAAATGGAAATGGAACTGGAAGAAGAGATTCTGTTAATAGGTTCAATAGTTGGCATCATTCTTCAAGAATCATAAGGGTTTCAAGAGCTTCTGGTGGTAAAGATAGACATAGTAAAGTTATGACTTCAAAAGGTTTAAGAGATAGAAGAGTTAGGCTTTCTGTTACAACAGCTATTCAATTTTATGATCTTCAAGATAGACTTGGTTATGATCAACCAAGTAAAGCTGTTGAATGGTTGATTAAATCAGCTTCTGATGCTATTTCTGAATTACCTTCACTTAATAATTCATTATTCAGTGATGATACACCTAATACTAATAATAATAATCAACCAAGTGAACAAGGTGTTGATTCAGCTGTTCATGATGCTGAAATGGTTATGGAAAATGGTGAAAATAATTATCTTTCTTTGTCTAAATCTGGTTGTAGTAGTACTTCTGAGACAAGTAAAGGTTCCGGTTTATCTCTTTCGAGATCCGATGTTCGTGTTAGCCGTGTTAAAGCTAGAGAAAGAGCAAGGGAAAGAACTGCTAAAGATAAAGAAAAAGAGAATCATCATCATCATCAGCATCAACATCAGCATCATCATCAACATCACAATGTGAACTCTTCTATTTCTCAAACAGCATCATTCACTGAACTTCTTACTGGTGGAATCAACAATACAGTTCCTACCACAAATAGTCCAAGAGATGAACCTAGTTTCTTCAACAAAGCAAGACAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAATGGAATTCTTCAGCACCAATGGATCATTACTTTAGTCCAGTGTTTGTAGGATCTTCTTCAACATCAAGAACACATCAACAACATCATAATCTATTAGGACATTCACTACATGATCATCAAACAATGACAATGTCTAATAATAACGCAGTTTCACCGTTCAGTAGTGGTGAAAATCATTCTGCAGATCAGAATCATCATCAGCATCATTTGCAGCATCCATTTTCATTTTTACCTGATCATATGATGCAAAATATGGTTACTTCTTCTTCTACTCAACCAAGCGGGAACAATGATTATAATCTTAACTTCACAATCTCTTCGGGCCTTGCTGGTTATAATAGGGGGACCCTTCAGTCCAATTCGCCGTCTCTTTTGTCTCATCTTCAAAGGTTTTCAGTTTCACCTTTAGATGGATCCAACAATCTACCATTTTTCATGGGAGGAGGAGGAGGAGTAGCTGCTTCTGCTTCAGCTTCTCCTGCTTCAGCTTCACCTGCTCCTACTACAATGGAGACTTGCAGCTCTATTCAGATCAGAAAGGAAAATCCAAAAACTGAAGAGTTTCACTTTTCCTCCATTTTCTTCTTGCAGGGTAAGGACTTCAATAAAATGGAGTACTAG 1446 0.3741 MEEEDEIQAQHKFPRVGNEDDNGNGNGTGRRDSVNRFNSWHHSSRIIRVSRASGGKDRHSKVMTSKGLRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKSASDAISELPSLNNSLFSDDTPNTNNNNQPSEQGVDSAVHDAEMVMENGENNYLSLSKSGCSSTSETSKGSGLSLSRSDVRVSRVKARERARERTAKDKEKENHHHHQHQHQHHHQHHNVNSSISQTASFTELLTGGINNTVPTTNSPRDEPSFFNKARQQQQQQQQQQQQWNSSAPMDHYFSPVFVGSSSTSRTHQQHHNLLGHSLHDHQTMTMSNNNAVSPFSSGENHSADQNHHQHHLQHPFSFLPDHMMQNMVTSSSTQPSGNNDYNLNFTISSGLAGYNRGTLQSNSPSLLSHLQRFSVSPLDGSNNLPFFMGGGGGVAASASASPASASPAPTTMETCSSIQIRKENPKTEEFHFSSIFFLQGKDFNKMEY 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04447 481 MobiDBLite consensus disorder prediction 1 37 - -
Trre7g04447 481 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 361 IPR005333 GO:0003700
Trre7g04447 481 MobiDBLite consensus disorder prediction 117 139 - -
Trre7g04447 481 Pfam TCP family transcription factor 54 205 IPR017887 -
Trre7g04447 481 MobiDBLite consensus disorder prediction 21 37 - -
Trre7g04447 481 MobiDBLite consensus disorder prediction 185 209 - -
Trre7g04447 481 MobiDBLite consensus disorder prediction 157 228 - -
Trre7g04447 481 ProSiteProfiles TCP domain profile. 55 113 IPR017887 -
Trre7g04447 481 ProSiteProfiles R domain profile. 185 205 IPR017888 -
Trre7g04447 481 MobiDBLite consensus disorder prediction 1 18 - -
Trre7g04447 481 MobiDBLite consensus disorder prediction 240 279 - -
Trre7g04447 481 MobiDBLite consensus disorder prediction 157 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04447 Trre-Chr7 52352785 52358232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04447 35 424 TCP Transcription Factor Family AT4G18390 42.995 3.26e-70 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Trre7g04447 TCP 8.4e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04447 - - mtr:120577367 576.63