Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04435 ATGAGGAAGAATTTGAACTTGGAACTTCGTCTTTTCCCTCTCTCAAATTCCGATCTTTGTTCCACAATGAAAGAAGAAGAAGAAGTAGCAGAAAGCAGTGAAAGTCCAGTACTACAAGATCAACAACACCGGCCATTTACCATTGTCTATGATGGCAAGATTTGCGTTCATGATGCCACAGAGATTCAGGCCAGATCAATTTTAATGCTTGCAAATAAAGAAATGGAGGAAAGAGTGAGGACACCAATTGGAGGAGCATCATCAGAGCCATCTTCACCATCAGTATTTAACTTGTATAGCCCTGGCACTTCTCCTTCCATGAAAAAATCACTGCAGAGGTTTCTCCAAAAGAGGAAGAATCGGATCCAAGAAGCATCCCCTTACCATCTTAAGATAAATAATTAA 405 0.4025 MRKNLNLELRLFPLSNSDLCSTMKEEEEVAESSESPVLQDQQHRPFTIVYDGKICVHDATEIQARSILMLANKEMEERVRTPIGGASSEPSSPSVFNLYSPGTSPSMKKSLQRFLQKRKNRIQEASPYHLKINN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04435 134 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 12 129 IPR040390 -
Trre7g04435 134 Pfam tify domain 41 72 IPR010399 -
Trre7g04435 134 ProSiteProfiles Tify domain profile. 39 73 IPR010399 -
Trre7g04435 134 Pfam Jas motif 108 128 IPR018467 -
Trre7g04435 134 MobiDBLite consensus disorder prediction 82 107 - -
Trre7g04435 134 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04435 Trre-Chr7 52271462 52273486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04435 1 129 Tify Gene Family AT1G30135 41.985 4.09e-23 85.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Trre7g04435 tify 5.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04435 - - gmx:100305565 150.599