Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04397 ATGGCTTTGTCTATACATAATAATCACTTTCACATAATCTCCTTGTTCTTGTTCTTGTTCTTGATTATTTTACCAACATCAATTTCCCAACAAGAACATAAATATGAAGAGTGTCAAAAACCATACACATGTGGTGGATTATCCGAATACTATCCATTTTGGGGGAAAAGCAGACCAAATTATTGTGGCAGCTACACCAATCAATTCCATCTCAAATGTGATTCTCAAAACACATCTATTCAAATTGTTTCACAAAATTTCCATGTCTTACGCATTGATCAACTCGGTTACACCATCAAAATGTTTCGAAAAGGCCTTGTTTATGATAATTGTTCTTCGGCTTTAACCAACACTTCTTTAGACTTGAGGCACTTTCAGTATATGCCTAATGTGAAAAACATCACTATTTTATATAACTGTCCTAATGATCTAAAGTTTGTAAATGGCACGAGCGTGAACTCGTTTTTGTGCAAGGAAGATGAGAAAAAACGCGCTTTCTATGCGGATTCTGCATTAGCAGAAGGTATAAAATGTGACGGTGTTCGGATTGAAGTTCAAGTAACACAGGAAGTGGAGCTTGGTGGTGGAATTGAAGGGTTGAACAAAGCTTTGAGTAGTGGATTTGATGTTAAATATTCTTCATATACTCAAGAATGCTTAAAATGTATTTTAAGTAATGGAACTTGTGGAGGGAATGATAGGTCTCAATTTTCCTGCTATTGTCCTGATGGAACTGAAGGTTTAGATTGTTCTCATCTCCACGACAATGGATGGAATTGGAAAAAGAAGTTTGGTGTAGGAGTTGCTGTTGCTGCTGTGGCCAGTGCAATTTTTGTAGGCATTGGCTTCTACATATATTATGGCAGAAAGAAGAAAAAGAACATTCATACGGTATCATCGACTGTATTATCTCGTAGTATTTCTAGTTCTAGTTCAGAAAACTCTGAGAATGGAAGTAGATATCATGGAGTCCATTTCTTCACCTATAGTGAACTTGAAAAAGCCACAAACTACTTTGATTCTACCACAGCACTAGGAGATGGAGGCTTTGGCACAGTCTATTTTGGAAAACTCCGAGACGGGCGTTTGGTTGCGGTGAAGCGCATGAACGAAAACAACTATAGAAGAGTTGAGCAATTTGTGAATGAAGTTGAGATCTTAACCGGCTTACACCATCAAAATCTTGTGTCACTATACGGATGCACTTCGCGCCACAGTCGGGAACTTCTGCTTGTATATGAATATGTTCCTAATGGAACTGTTGCTGATCATCTTCATGGTAAAAAAGCAAAACCTGGCATGCTACCTTGGCATATCAGAATGAACATTGCAATAGAAACTGCTAGTGCATTGGTATATCTTCATGCCACCGACATCATCCATAGAGATGTGAAAACAACAAACATTCTCCTTGACAGTCATTTTAGTGTCAAAGTAGGAGATTTTGGACTTTCGCGTCTATTTCCGATCCATGTTACGCATATTTCAACTGCTCCACAAGGGACTCCTGGTTACGTGGATCCGGAATATCATTTGTACTATCAACTTACGGATAAAAGCGATGTATTTAGCTTCGGAGTTGTGTTGATTGAACTGATATCATCTATGCCTGCTGTCGATATCTTGAGGAATAAGCAAGAAATCAATTTGTCTAACATGGCTATTAAGAAGATTCAAAATGGAACATTGCATGAACTTGTTGACCCTACACTTGGTTTTGAATCAAATTTCAAGGTAAGGAAAATGATCAATGCTGTAGCAGAGTTAGCATTTCAATGTTTGCAAAGTTCTAAAGATGTTAGACCTTCTATGGTTGAAGTGTTGGAAAGGCTTAAAGATATTCAGAGTGATGATGGAACATATAAATGTAAACCTGAAGTGTTGGATATATCAGTTGATGATGATATTACTTTGATAAAAAATGATCCACCACCATCATCACCAGATTCAAATATCATTATTTTCCCCTGA 1971 0.3739 MALSIHNNHFHIISLFLFLFLIILPTSISQQEHKYEECQKPYTCGGLSEYYPFWGKSRPNYCGSYTNQFHLKCDSQNTSIQIVSQNFHVLRIDQLGYTIKMFRKGLVYDNCSSALTNTSLDLRHFQYMPNVKNITILYNCPNDLKFVNGTSVNSFLCKEDEKKRAFYADSALAEGIKCDGVRIEVQVTQEVELGGGIEGLNKALSSGFDVKYSSYTQECLKCILSNGTCGGNDRSQFSCYCPDGTEGLDCSHLHDNGWNWKKKFGVGVAVAAVASAIFVGIGFYIYYGRKKKKNIHTVSSTVLSRSISSSSSENSENGSRYHGVHFFTYSELEKATNYFDSTTALGDGGFGTVYFGKLRDGRLVAVKRMNENNYRRVEQFVNEVEILTGLHHQNLVSLYGCTSRHSRELLLVYEYVPNGTVADHLHGKKAKPGMLPWHIRMNIAIETASALVYLHATDIIHRDVKTTNILLDSHFSVKVGDFGLSRLFPIHVTHISTAPQGTPGYVDPEYHLYYQLTDKSDVFSFGVVLIELISSMPAVDILRNKQEINLSNMAIKKIQNGTLHELVDPTLGFESNFKVRKMINAVAELAFQCLQSSKDVRPSMVEVLERLKDIQSDDGTYKCKPEVLDISVDDDITLIKNDPPPSSPDSNIIIFP 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04397 656 Pfam Wall-associated receptor kinase galacturonan-binding 38 101 IPR025287 GO:0030247
Trre7g04397 656 FunFam Wall-associated receptor kinase-like 20 416 623 - -
Trre7g04397 656 FunFam receptor-like protein kinase FERONIA 301 415 - -
Trre7g04397 656 Pfam Protein kinase domain 342 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04397 656 SUPERFAMILY Protein kinase-like (PK-like) 312 611 IPR011009 -
Trre7g04397 656 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 13 651 IPR044652 GO:0004672
Trre7g04397 656 SMART serkin_6 339 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04397 656 ProSitePatterns EGF-like domain signature 1. 239 250 IPR000742 -
Trre7g04397 656 Pfam Wall-associated receptor kinase C-terminal 177 244 IPR032872 -
Trre7g04397 656 ProSitePatterns Protein kinases ATP-binding region signature. 345 367 IPR017441 GO:0005524
Trre7g04397 656 Gene3D Phosphorylase Kinase; domain 1 309 415 - -
Trre7g04397 656 Gene3D Transferase(Phosphotransferase) domain 1 416 624 - -
Trre7g04397 656 CDD STKc_IRAK 345 614 - -
Trre7g04397 656 ProSiteProfiles Protein kinase domain profile. 339 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04397 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04397 Trre-Chr7 51833883 51836989 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04397 40 650 Receptor kinase-like Gene Family AT1G25390 44.179 1.27e-146 438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Trre7g04397 Pkinase 5.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04397 - - vra:106766190 828.55