Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04377 ATGCAACTTCCCATTGCTGTTGCTGTTGCAGTAACAACATCACTCGTTGCATTATTCATCATCGGATTCTTCATCTTCCGGTGTCTAAAAAAACCTACAGCAAGAGACAACAAAACTCAAGAACCTCAAAACACGTGTCTTCACTTTTCCATCGAAGAAATAAGAACCGCCACTAAAAACTTCAACGACAGTTTAATCATCGGCAACGGAGGTTTCGGAAACGTTTACAAAGGAAACATTGAAAGATGTCACTCTCAACACCCCCATTGTGGGTGGTCTGAGAAGTGGGTTGCGAAGGTTTCGGATTTCGGGTTATCGAAAGATGGACCAAACGGGTCGACCCATGTTACAACTGATGTGAAGGGTAGTATCGGGTATTTGGATCCTGAATATTATGTGAGTCAATGGTTGAGTCAAAAATCTGACGTGTACTCTTTTGGTGTGGTTTTGTTGGAGGTATTGTGTGGGAGACCACCTATTAAGAGTAGGGTGGACAAGCATGAGGAGTCTTTGGTGGGTTGGTTTAAGAAGTGTTTTGATGAAGGTAAAGTTGATCGAACGGTTGATCCTGTTTTGAAGGGAACGATTAAGATTAAGTGTTTGATGAAATTTGTTGAGGTTGCTTTGAGTTGTTTGCATCATCATGGAAAGCAACGGCCTTTGATGAAAGATGTAGTCATGGGGTTGGAGTGTGCATGGAATTTGCAACATGGTGGGGCCCATGTTAAGGGTAAGGGAAAGATTCGAAAGAGTGAGGAGGAGAAGGAAATTGAGGTTGAGAGTTTTGGGAGAGTGGAGGAGTGTAGTAGTAGCAAGGACACGACAATAACATCAACATGCAGTGAGGAAGAGCAAGCTTTGGTGATGGTTGGAGGGATTCATGAGAGCTTGGATATCCCATAG 903 0.4319 MQLPIAVAVAVTTSLVALFIIGFFIFRCLKKPTARDNKTQEPQNTCLHFSIEEIRTATKNFNDSLIIGNGGFGNVYKGNIERCHSQHPHCGWSEKWVAKVSDFGLSKDGPNGSTHVTTDVKGSIGYLDPEYYVSQWLSQKSDVYSFGVVLLEVLCGRPPIKSRVDKHEESLVGWFKKCFDEGKVDRTVDPVLKGTIKIKCLMKFVEVALSCLHHHGKQRPLMKDVVMGLECAWNLQHGGAHVKGKGKIRKSEEEKEIEVESFGRVEECSSSKDTTITSTCSEEEQALVMVGGIHESLDIP 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04377 300 ProSiteProfiles Protein kinase domain profile. 1 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04377 300 SMART serkin_6 19 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre7g04377 300 ProSitePatterns Protein kinases ATP-binding region signature. 67 99 IPR017441 GO:0005524
Trre7g04377 300 PANTHER OS07G0166700 PROTEIN 45 86 IPR045272 GO:0004714|GO:0006468
Trre7g04377 300 Gene3D Phosphorylase Kinase; domain 1 26 85 - -
Trre7g04377 300 Pfam Protein tyrosine and serine/threonine kinase 94 227 IPR001245 GO:0004672|GO:0006468
Trre7g04377 300 Gene3D Transferase(Phosphotransferase) domain 1 86 237 - -
Trre7g04377 300 SUPERFAMILY Protein kinase-like (PK-like) 94 227 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04377 Trre-Chr7 51618431 51622711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04377 42 81 Receptor kinase-like Gene Family AT3G51550 57.500 2.76e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Trre7g04377 PK_Tyr_Ser-Thr 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04377 - - cam:101489535 278.1