Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04354 ATGGAACAACAACAACAACCACTTTCCTTTTCACTTTCAGCTTCATCTTCAGTTTCAGATTCTTTAGAAAATCATTCAAATCCATCAGATGCAGTTATTTTCTTTGGTCTTAGTCTTGCTCTTGGAATTGCTTGCAGACATCTTTTGCGTGGGACTAGAGTCCCTTACACTGTTGCTTTGCTTATCCTTGGCATTGCTCTTGGATCCTTAGAATATGGTACTCATCATCGGCTGGGAAAGATTGGGGATGGAATTCGTCTTTGGTCGGAGATCGATCCAGAGCTCCTGTTAGCCGTTTTTCTTCCTGCTCTCCTTTTCGAGAGCTCATTCTCAATGGAAGTTCACCAAATTAAGAGATGTATTGCACAAATGATCATACTAGCTGGTCCAGGTGTTGTGATTTCAACCGTTTTTCTTGGATCTATGTTGAAGTTTACTTTTCCATATAACTGGAGTTGGAAAACGTCGCTGTTGCTTGGGGGACTTTTGAGTGCAACTGATCCTGTTGCAGTTGTAGCCTTGTTGAAAGACCTTGGTGCCAGCAAAAAACTAAGCACAATAATTGAAGGGGAGTCCCTGATGAATGATGGAACGGCTATTGTGGTTTATACCCTTTTCTATCGAATGGTTCTTGGAGAGACCTTCAACTGGGTTGCCATAATCAAGTTTCTAGCACAAGTTTCACTTGGAGCTGTAGGAATTGGCCTTGCTTTCGGGATTGCATCCGTTTTATGGCTTGGGTTTATTTTTAATGATACAGTGATTGAGATTTCTTTAACACTTGCTGTTAGCTACGTTGCTTACTTCACTGCTCAAGAGAGTGCAGGTGTTTCTGGTGTTTTGACAGTGATGTCATTGGGAATGTTCTATTCTGCATTTGCAAGGACAGCTTTTAAGGGTGAAAGTCAACAAAGCTTACATCACTTTTGGGAAATGATTGCTTATATTGCTAATACAATAATTTTCATTTTGAGTGGAGTTGTTATAGCTGAAGGAATACTTGGTGATGGCACAGTTTTCTCTCATGGAAAATCATGGATCTACCTCTTTCTTCTCTATGCCTATGTTCAAGTGTCTCGATGCATTGTTGTTGGAGCATTATTTCCCTTTCTAAGATATTTTGGATATGGTTTGGATTGGAAAGAAGCTATTATTCTCATCTGGTCTGGGTTGCGAGGAGCAGTTGCCTTGTCACTTTCGCTATCGGTTAAGCGTTCAAGTGGCAGATCAATTGAATTGACTCCAGAGACAGGAACAATGTTTGTTTTCTTCACTGGTGGAATTGTGTTTTTAACACTTATAGTGAATGGTTCAACCACACAGTTCATATTACACTTCCTTGGCATGAATAAGTTATCATCTGCTAAGAGACGTATCCTTGAATTTACAAAGTATGAAATGGTTAACAAAGCATTAGAGGCTTTTGGTGAACTTGGAGATGATGAGGAACTTGGGCCTGCTGACTGGCCAACAGTGAAGAGATATATGTCCTGCTTAAATGACATTGAAGGTGAATGTGTTCATCCTCATGGTCCATCTGAAAGTGACAATAACTTAGACCCTATGAATTTGAAAGACATACGAGTACGCCTTCTGAATGGTGTCCAAGCTGCTTACTGGGAGATGCTTGATGAAGGAAGAATTACTCAAACAACAGCTAATATCCTAATGCTATCAGTGGAGGAATCAATAGATTTGGCTTCATCTAAGCCCCTATGTGACTGGAAAGGTTTAAAATCTAATGTTCATTTCCCAAGTTACTACAAGTTCCTCCAGTCAAGTATGTTGCCAGCGAAGTTAGTTACATACTTCACTGTGGAAAGGTTGGAGTCAGCATGTTATATCTGTGCTTCATTTCTTCGTGCCCACAGAATTGCTCGACAACAATTACATGACTTCATAGGTGACAGTGATGTTGCTTCTGCTGTCATCAATGAAAGTATTACAGAGGGGGAAGAAGCACGAAAGTTCCTAGAAGATGTTAATTTGACATACCCTCAGGTTTTACGTGTCGTAAAGACAAGGCAAGCAACATATGTAGTGCTTAATCATTTACTTGAATATGTTCAAAACCTTGAGAAAGCTGGGATATTGGAAGAGAAAGAGATGCTACATCTTCATGATGCTGTCCAGACTGATTTAAAGAAATTACTTAGAAACCCTCCTTTGGTTAAGCTTCCTAAAATAAGTCATATACATCCTATGTTGGATGCTCTGCCATCTTCAGTTCGTGGACCACTTGTAAGTGGTAGAAAGGAAACAATGAAATTGCGTGGCTTGACACTTTACAAGGAAGGTGCCAAATCAAATGGTATTTGGTTAATTTCTAATGGGGTGGTGAAGTGGGAAAGCAAGATGATTAAAAGCAAGCACCCTTTTTATCCAACTTTTACGCATGGGAGCACATTAGGTCTTTATGAAGTGCTGACCGGAAGACCATATATCTGTAATGTTGTCACAGACTCCATCGTATTCTGCCTTTTTATAGATGCAAATAAGATAATTTCATGTCTCAAATCTGACCCTTCAATGGAAGACTTCCTTTGGCAGGAAAGTGCTATTTTCCTTTCCAAACTATTGCTTCCTCAGATATTTGAGAAACGAACGGTGCAAGATTTAAGAGGTCTCATTGCTGAAAGATCTGAAATGACCATGTATATAAGAGGGGAAACAATCGAAATACCTTATCATTCAGTTGCCTTCTTACTGGAGGGATATGTCAAAATTCAAGGTCATCAAGAACTGGTAACCGCACCAGCAGCCCTGGTTCCTCCTCATGGGAATCGAAGCTTCCAAAATTTGTCAATGTCAGGTATTAAGGAGGGTAGTTTTATTCATCAAGGATCTTGTTATCTGGTTGAAACTAGAGCAAGGGTAATTGTGTTTGACATTGCTGCATTTGAGCCTGATACTGCTCTTGTTAAAAAGTCAAGTTCACGGTCATCACATGCCATGGATCATCCTCATAGATCTTTCCGTAAACAACATAGTGGCCTTATGAGTTGGCCTGAACATTTCTACACGCAGAATCAGCATAAGCAGAACTCCGAACATCAAAGCAATAGTCTGTCTGCAAGGGCAATGCAGCTGAGCAAATATGGGAGCATGGTGGACATTCCTCACCGGAGTAGAAGTTTGTCAACCAATCGCTCTAGACCAACGCCTCAAAGTTTGTCATATCCATCCTTTATGCCACATCAAGGTCGTCCACTTGGTTCAGTCAAATCAGAAGGAGCTGCAACTAGCCAAAAGAATATCGGAGTGAAAGGGTTCATGGAAGATGTTACAAATCTCCCTTCACAAAGCACAGATCGAAGAGTACATCGTGAAGATGATTCAAGTGATGATTCTGCTATTGAAGAAGATATTATTGTGAGGATTGATTCACCAAGTACACTATCTTTTCGCCCATCTTGA 3417 0.4033 MEQQQQPLSFSLSASSSVSDSLENHSNPSDAVIFFGLSLALGIACRHLLRGTRVPYTVALLILGIALGSLEYGTHHRLGKIGDGIRLWSEIDPELLLAVFLPALLFESSFSMEVHQIKRCIAQMIILAGPGVVISTVFLGSMLKFTFPYNWSWKTSLLLGGLLSATDPVAVVALLKDLGASKKLSTIIEGESLMNDGTAIVVYTLFYRMVLGETFNWVAIIKFLAQVSLGAVGIGLAFGIASVLWLGFIFNDTVIEISLTLAVSYVAYFTAQESAGVSGVLTVMSLGMFYSAFARTAFKGESQQSLHHFWEMIAYIANTIIFILSGVVIAEGILGDGTVFSHGKSWIYLFLLYAYVQVSRCIVVGALFPFLRYFGYGLDWKEAIILIWSGLRGAVALSLSLSVKRSSGRSIELTPETGTMFVFFTGGIVFLTLIVNGSTTQFILHFLGMNKLSSAKRRILEFTKYEMVNKALEAFGELGDDEELGPADWPTVKRYMSCLNDIEGECVHPHGPSESDNNLDPMNLKDIRVRLLNGVQAAYWEMLDEGRITQTTANILMLSVEESIDLASSKPLCDWKGLKSNVHFPSYYKFLQSSMLPAKLVTYFTVERLESACYICASFLRAHRIARQQLHDFIGDSDVASAVINESITEGEEARKFLEDVNLTYPQVLRVVKTRQATYVVLNHLLEYVQNLEKAGILEEKEMLHLHDAVQTDLKKLLRNPPLVKLPKISHIHPMLDALPSSVRGPLVSGRKETMKLRGLTLYKEGAKSNGIWLISNGVVKWESKMIKSKHPFYPTFTHGSTLGLYEVLTGRPYICNVVTDSIVFCLFIDANKIISCLKSDPSMEDFLWQESAIFLSKLLLPQIFEKRTVQDLRGLIAERSEMTMYIRGETIEIPYHSVAFLLEGYVKIQGHQELVTAPAALVPPHGNRSFQNLSMSGIKEGSFIHQGSCYLVETRARVIVFDIAAFEPDTALVKKSSSRSSHAMDHPHRSFRKQHSGLMSWPEHFYTQNQHKQNSEHQSNSLSARAMQLSKYGSMVDIPHRSRSLSTNRSRPTPQSLSYPSFMPHQGRPLGSVKSEGAATSQKNIGVKGFMEDVTNLPSQSTDRRVHREDDSSDDSAIEEDIIVRIDSPSTLSFRPS 1138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04354 1138 MobiDBLite consensus disorder prediction 1103 1123 - -
Trre7g04354 1138 ProSiteProfiles cAMP/cGMP binding motif profile. 735 830 IPR000595 -
Trre7g04354 1138 MobiDBLite consensus disorder prediction 1040 1123 - -
Trre7g04354 1138 MobiDBLite consensus disorder prediction 1041 1063 - -
Trre7g04354 1138 PANTHER SODIUM/HYDROGEN EXCHANGER 21 788 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Trre7g04354 1138 Gene3D Jelly Rolls 739 859 IPR014710 -
Trre7g04354 1138 Pfam Sodium/hydrogen exchanger family 33 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Trre7g04354 1138 Gene3D - 152 204 - -
Trre7g04354 1138 SUPERFAMILY cAMP-binding domain-like 733 849 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04354 Trre-Chr7 51412552 51422572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04354 28 1136 Antiporters AT2G01980 64.286 0.0 1404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04354 K14726 - gmx:100789429 1839.7