Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04337 ATGGTTTTTCCAAAACCAGCTTCTGAGTCTGACCTTTTTCTTCCCTATAACTTCACCTCTCCTTATAATATAGACTCTCTTCCTAGGTTTAGTATACCAGAGAATTCAATGCCAAAGGAAGCTGCATACCAAAGCATACATGATGAGTTGCAGCTGGATGCTATTCCAAAGTTGAACTTGGCTTCCTTTGTCACAACATCCATGGAGGAAGAATGCAATAAGCTTATTATGGAATCAATCAATAAGAACTATGTTGACATGGATGAGTATCCAGCTACTACTGATCTTCATAATCGATGTGTGAACATGATAGCGCGTTTGTTCAATGTTGAGATTGGAGAAAATGAGAGTGCAATTGGTGCAGGAACAGTTGGATCGTCCGAGGCCATAATGTTGGCAGGACTTGCATTCAAGAAGAAGTGGCAGAACAAACGCAAGGCCGAAGGCAAACCGTATGATAAGCCTAACATGGTCACTGGTGCGAACGTGCAAGTATGTTGGGAGAAATTTGCTAGGTATTTTGAGGTGGAATTGAGGGAAGTAAATGTGAGAGAAGATTACTATGTAATGGACCCTGCGAAGGCCGTTGAGATGGTAGATGAAAACACAATTTGTGTGGCTGCAATCTTAGGTTCAACTTATAACGGAGAATTCGAAGATGTCAAACTCTTGAATGATCTTTTGTTAGAAAAAAACAAGCAAACTGGATGGGATACACCGATTCATGTTGATGCCGCAAGTGGTGGCTTTATTGCTCCTTTCCTATATCCAGAGCTAGAGTGGGATTTCAGACTCCCATTAGTGAAGAGCATAAATGTTAGTGGCCATAAGTATGGACTTGTTTATGCCGGAATCGGCTGGGTTATATGGAGGACTAAAGAAGACTTGCCTGAAGACCTTATCTTCCATATTAATTATCTTGGAGCTGACCAACCCACCTTCACTCTAAATTTTTCAAAAGGTTCTAGTCAGATAATTGCTCAATATTATCAGCTAATTCGCCTTGGTCAAGAGGGGTATCGGCGTATAATGGAAGACTGTAGAGAAAATGCGATGGTGTTGAAGAAACATTTAGAAGAGACGGGATACTTTAACATACTCTCAAAAGATAACGGAGTTCCTGTAGTGGCATTTTCTCTAAAGGACAGAAGCCAATATGATGAATTCAAGATATCAAAGATGCTGCGACGCCACGGTTGGGTTGTGCCGGCATATCCAATGCCACCAGGTGCTGAACACATTAAAGTGCTTCGTGTGGTCATCAGAGCTGAGTTTTCACGCACACTTGCTGAACGCCTTGCGCTTGACATAAAAAATGTGTTGCGCGAGCTTCAAAAACTTCCCCTCAACATTAAGGATGAGAAGTCCTTGGTTGACACTGCATTAGAAGCTAACATGGAAATCATTGCTCAAGAATCTAACAAGCGTCAGAAAATCATGGCTGCCTAA 1449 0.4168 MVFPKPASESDLFLPYNFTSPYNIDSLPRFSIPENSMPKEAAYQSIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPATTDLHNRCVNMIARLFNVEIGENESAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEGKPYDKPNMVTGANVQVCWEKFARYFEVELREVNVREDYYVMDPAKAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRRIMEDCRENAMVLKKHLEETGYFNILSKDNGVPVVAFSLKDRSQYDEFKISKMLRRHGWVVPAYPMPPGAEHIKVLRVVIRAEFSRTLAERLALDIKNVLRELQKLPLNIKDEKSLVDTALEANMEIIAQESNKRQKIMAA 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04337 482 FunFam Glutamate decarboxylase 66 360 - -
Trre7g04337 482 CDD DOPA_deC_like 59 438 - -
Trre7g04337 482 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trre7g04337 482 NCBIfam glutamate decarboxylase 18 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trre7g04337 482 Gene3D - 66 360 IPR015421 GO:0003824
Trre7g04337 482 Gene3D - 361 448 - -
Trre7g04337 482 Gene3D - 1 65 - -
Trre7g04337 482 FunFam Glutamate decarboxylase 5 65 - -
Trre7g04337 482 PANTHER GLUTAMATE DECARBOXYLASE 11 464 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trre7g04337 482 SUPERFAMILY PLP-dependent transferases 25 446 IPR015424 -
Trre7g04337 482 FunFam Glutamate decarboxylase 361 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04337 Trre-Chr7 51298832 51301210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04337 1 451 Calmodulin-binding Proteins AT2G02010 77.827 0.0 750