Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04333 ATGGTTGCCCAACAGCCGCAACTTCAGATTCAGACCAATCAACCTACACCTTCTCCTCAAGATGAAGCCTTGAAGAGGAACACCGATTGTGTTTACTTTCTTGCTTCTCCTTTGACATGCAAAAAGGGAAATGAATGCGAATACCGCCACAGTGAGTATGCTCGAGTCAATCCTAGAGATTGCTACTATTGGTTGAATGGTAACTGCCTGAATCCCAAGTGTTCATTTCGTCATCCGCCTCTTGACGGGTTGATAGGAACACCGACGGCAACCGCTGCTGCTGGACCATCGGTACCTGCGCCACAGATTGCAGCATCACCTGCAACGCATGCACCTTACAATTCTAGTAAACAAGCCGTCCCTTGCATTTTCTTCCAAAAGGGGTATTGCTTAAAAGGTGACAGATGTGCCTTCCAGCACGGACCGATTCCTAACAATGGCAGTAAAATAGCTACACAGGGCTCAATGACCAACCAAGGAGCTGAAAATCCAAGTTTTAAGAAACCTTTTGGCGGTATTGAAAAACATACGCAGGAAAGGAAAACCTCACAAGGAAACGTTGCAACTTTTGGAGGTGCTGAAGCTAAACCTGTCCAAAAATTTGAAACTGCTCCGCAGAAAAATATATTTAAATTGGAGAAGCGTGTGGCACCGCCATCTGCAGGGTTTGATAGCGAGGCTTCGAGATTTAAGACACCTAGTTCACCACCGGCCAATGGGCCTAATGTATCCCGGTCTAATCGTGTGCATCAACCTCGTGTGCCGGATGATCACAGTTTCCATAGCGGTAAGGACAGCGACGAATTTCTCAGAGAATCATCTCCTGGGTTTGATGTTCTTGTAGCTGATGAGCTTAGGAATTCTGATTATTATCATGGGGAAGATGAATTTGGTAAAGCAAGAGGTCAAGATGAAAGAGGCCTAGACTCTCTGAATGAATTTGATGTAGGGCATTCTGCTGATTATAGTTTAGCCGCTGATATTGATCGAGAAAGATTTCGTGGGCCTCAGGGTTATGACTCATATGATCACTTGCAAGAGCCATATGGTTGGGAGCCTAGAAAGGCATCAGCCCATATAGAAAGAAAAACTCATCACAAATCTGGCAGTCCTCCTGACAGTGTTGAGGTGTCAGATCTTAGACACCGTTTATCCAAGCGCAGGAAGGGCAATGGTCTAAAATCTGTTGTCGCTCATGATTATGCCCTCGAGAGCCATGGTGAGGAGCGAAGTCATCGGTTCCCTCGGAAGGATTCACATCAGTTACCTTCGAATGAAAGACCTGTCAATAATCGTTTCCGAGGCAGAATAACACTTCCACCAAATGGTGGTGACGGTCACCTGGAGAGGGACTTAAACAGAGGAAGGGACTTAGACAGAGGAAGAGACTCAGACAGAGGAAGAGTCAGTAGTAGGCTATCATCTGGAAGGCTGCAAACCCCTCCTGATGGAAGATTCCACGACAGAATGAGAGGAAGGTTGTCAGATGATGAGAGGGGAAACTTCAGAGGCCGATCGATGGGGGACCGAAGTGGGTTCTCTGCGCCTAAAAGTCTTGCTGAACTTAAATATGGGAGAAGCACTGATAATAATGAGCAACAATCATTAGGAAAGAGAAAAAGCTTCAGGGATCACCAGCAATACGAAGATGATGTACCATTCGAAGGTCCAAAACCTCTTAGTGAAATTCTGAAGGAAAAGAAAGGAGTCGGAGCTGGCGAAACCTCCTCCCAGAGTCACAAATCAGCCTACAATAACAATGAAGGAATTACCGAAAACGGAGCATTGCCCGAAACCGAAACCAAGGAAGACGAATCCAAGATTCAGGCTGCTGACGGAGTTGACAATACTGATGCAACTCACGGTCAATCATCCGAAGATGGAATGATATACGACGAAGCTGCCGAAGATCAGGAGTACGAAGGTGATGATCAACGAGAGGAAGGAGACTATGAATACGAACAAGGTGACGAGGAGTACGACTATGAACAAGTCGAAGAAGGCGAAAATCAAGAGCAAGAATATATGGAAGATGAAGATGGAGATGACTTTGCCAAGAAGATTGGTGTTGTTCTTTCATAA 2082 0.4573 MVAQQPQLQIQTNQPTPSPQDEALKRNTDCVYFLASPLTCKKGNECEYRHSEYARVNPRDCYYWLNGNCLNPKCSFRHPPLDGLIGTPTATAAAGPSVPAPQIAASPATHAPYNSSKQAVPCIFFQKGYCLKGDRCAFQHGPIPNNGSKIATQGSMTNQGAENPSFKKPFGGIEKHTQERKTSQGNVATFGGAEAKPVQKFETAPQKNIFKLEKRVAPPSAGFDSEASRFKTPSSPPANGPNVSRSNRVHQPRVPDDHSFHSGKDSDEFLRESSPGFDVLVADELRNSDYYHGEDEFGKARGQDERGLDSLNEFDVGHSADYSLAADIDRERFRGPQGYDSYDHLQEPYGWEPRKASAHIERKTHHKSGSPPDSVEVSDLRHRLSKRRKGNGLKSVVAHDYALESHGEERSHRFPRKDSHQLPSNERPVNNRFRGRITLPPNGGDGHLERDLNRGRDLDRGRDSDRGRVSSRLSSGRLQTPPDGRFHDRMRGRLSDDERGNFRGRSMGDRSGFSAPKSLAELKYGRSTDNNEQQSLGKRKSFRDHQQYEDDVPFEGPKPLSEILKEKKGVGAGETSSQSHKSAYNNNEGITENGALPETETKEDESKIQAADGVDNTDATHGQSSEDGMIYDEAAEDQEYEGDDQREEGDYEYEQGDEEYDYEQVEEGENQEQEYMEDEDGDDFAKKIGVVLS 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04333 693 Gene3D - 108 184 - -
Trre7g04333 693 Gene3D - 16 81 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 250 271 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 401 423 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 572 594 - -
Trre7g04333 693 ProSiteProfiles Zinc finger C3H1-type profile. 55 81 IPR000571 GO:0046872
Trre7g04333 693 SUPERFAMILY CCCH zinc finger 117 141 IPR036855 GO:0046872
Trre7g04333 693 MobiDBLite consensus disorder prediction 220 271 - -
Trre7g04333 693 Pfam RNA-binding, Nab2-type zinc finger 121 141 - -
Trre7g04333 693 ProSiteProfiles Zinc finger C3H1-type profile. 116 143 IPR000571 GO:0046872
Trre7g04333 693 MobiDBLite consensus disorder prediction 630 679 - -
Trre7g04333 693 Pfam Zinc-finger containing family 25 79 IPR041686 -
Trre7g04333 693 MobiDBLite consensus disorder prediction 353 693 - -
Trre7g04333 693 FunFam Zinc finger CCCH domain-containing protein 17 18 81 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 353 383 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 147 164 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 227 249 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 1 22 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 447 470 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 482 505 - -
Trre7g04333 693 SMART c3hfinal6 25 52 IPR000571 GO:0046872
Trre7g04333 693 SMART c3hfinal6 116 142 IPR000571 GO:0046872
Trre7g04333 693 SMART c3hfinal6 57 80 IPR000571 GO:0046872
Trre7g04333 693 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 21 691 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 147 202 - -
Trre7g04333 693 ProSiteProfiles Zinc finger C3H1-type profile. 24 53 IPR000571 GO:0046872
Trre7g04333 693 MobiDBLite consensus disorder prediction 536 569 - -
Trre7g04333 693 MobiDBLite consensus disorder prediction 597 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04333 Trre-Chr7 51271695 51274680 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Trre7g04333 zf-CCCH_3 5.4e-12 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04333 - - gmx:100787836 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04333 7 51271695 51274680 Trre7g04333 7 51271695 51274680 ECH