Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04311 ATGAGTTCAGTGGCACCATATTCACTTGGGACTTGTCTCACCTCATTGCACCTCCAAAAACGTAACCATTCTTCTGCATCATCATCAACAACAACAACATGTTCTTCTGTTCAACAACAACCACCACTTCTTGTACAAAAGGAGAATCAATTAAAAAGAAGAGAAGCAATAAGCCTCTCCTTCAGTTTTGGCCTTCTTCATTCTTTCTTACAACCTATAATACCTCTCACTGCAATAGCAGCAGAAGCAGTTCCATGTGAATTAACAGTTGCTCCTTCAGGGCTATCTTTTTGTGATAAAGTTGTTGGCACTGGTTCTCAAGCTGTTAAGGGACAACTTATTAAGGCACATTATGTGGGGAGATTGGAGAATGGAAAAGTTTTTGATAGCAGTTATGATCGTGGCAAGCCACTTACGTTTCGCGTTGGTGTTGGAGAGGTTATCAAAGGATGGGATGAAGGCATTTTAGGAGGTGATGGAATTCCTCCTATGCTTACAGGAGGTAAACGTACATTGAAGCTTCCTCCGGAACTTGGATACGGTTTAAGAGGGGCTGGTTGTAGAGGAGGTTCATGTGTCATTCCTCCGGATTCAGTACTCTTATTCGATGTGGAGTTTGTTAGCAAAGCATGA 633 0.4202 MSSVAPYSLGTCLTSLHLQKRNHSSASSSTTTTCSSVQQQPPLLVQKENQLKRREAISLSFSFGLLHSFLQPIIPLTAIAAEAVPCELTVAPSGLSFCDKVVGTGSQAVKGQLIKAHYVGRLENGKVFDSSYDRGKPLTFRVGVGEVIKGWDEGILGGDGIPPMLTGGKRTLKLPPELGYGLRGAGCRGGSCVIPPDSVLLFDVEFVSKA 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04311 210 Gene3D - 82 210 IPR046357 GO:0003755
Trre7g04311 210 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 25 209 IPR044183 GO:0009507
Trre7g04311 210 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 107 206 IPR001179 GO:0003755
Trre7g04311 210 SUPERFAMILY FKBP-like 88 208 - -
Trre7g04311 210 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 111 210 IPR001179 GO:0003755
Trre7g04311 210 FunFam Peptidylprolyl isomerase 83 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04311 Trre-Chr7 51089965 51092731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04311 111 208 Calmodulin-binding Proteins AT5G48570 42.857 5.12e-17 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04311 K01802 - qsu:112039264 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre7g04311 7 51089965 51092731 Trre7g04311 7 51089965 51092731 ECH