Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre7g04308 ATGGTCATGGTCTCATGGATATGCACCAATCTTAGCACAAGGCAAATTGCAGTGGAAGATGCTCCAAGGAAAAGATCAATGGATCTTAGATTACTTCATGGAGTTGCTTATGGTCACTCTTGGTTTGGTAGGTGGAGCTATAAGATCTGTCGTGGAAGCTTTGGTGTGACGGCACAAAACTACTATGAAGCAATGGAAACTCTTGGTTCATTAGTGCTTGATGATATTATAAGAGATTTGAGTAAGACAAAGTATCATAAAGATATCAAACAAATGATTTGTTTCTATAGAGATATGAGTGAAACTCGAATAGTCACAATAAGGGAACTCCTTAGATTCATGCTTAATATCTTATTAGAATGA 363 0.3664 MVMVSWICTNLSTRQIAVEDAPRKRSMDLRLLHGVAYGHSWFGRWSYKICRGSFGVTAQNYYEAMETLGSLVLDDIIRDLSKTKYHKDIKQMICFYRDMSETRIVTIRELLRFMLNILLE 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre7g04308 120 PANTHER PHD FINGER PROTEIN MALE MEIOCYTE DEATH 1-RELATED 3 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre7g04308 Trre-Chr7 51076525 51076887 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre7g04308 2 117 PHD Transcription Factor Family AT5G22260 38.136 6.00e-23 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre7g04308 K26271 - gmx:100797388 162.925